RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 PPP1R42Q7Z4L9 355 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 PDZRN3Q9UPQ7 1066 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
CCDC115-201ENST00000259229 LAMB2P55268 1798 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 GPTP24298 496 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 BCL2L12Q9HB09 334 aa22.17■■□□□ 1.14
CCDC115-201ENST00000259229 RGL2O15211 777 aa22.16■■□□□ 1.14
CCDC115-201ENST00000259229 HMMRO75330 724 aa22.16■■□□□ 1.14
CCDC115-201ENST00000259229 AK7Q96M32 723 aa22.16■■□□□ 1.14
CCDC115-201ENST00000259229 DDX60Q8IY21 1712 aaKnown RBP22.15■■□□□ 1.14
CCDC115-201ENST00000259229 RABL6Q3YEC7 729 aaPredicted RBP22.15■■□□□ 1.14
CCDC115-201ENST00000259229 ARHGEF1Q92888 912 aaKnown RBP22.15■■□□□ 1.14
CCDC115-201ENST00000259229 NARFQ9UHQ1 456 aa22.15■■□□□ 1.14
CCDC115-201ENST00000259229 HDAC5Q9UQL6 1122 aa22.15■■□□□ 1.14
CCDC115-201ENST00000259229 MYH3P11055 1940 aa22.14■■□□□ 1.14
CCDC115-201ENST00000259229 PCCAP05165 728 aaPredicted RBP22.14■■□□□ 1.14
CCDC115-201ENST00000259229 NUCB1Q02818 461 aa22.14■■□□□ 1.14
CCDC115-201ENST00000259229 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.14
CCDC115-201ENST00000259229 SRGAP3O43295 1099 aa22.13■■□□□ 1.13
CCDC115-201ENST00000259229 FOXO4P98177 505 aa22.13■■□□□ 1.13
CCDC115-201ENST00000259229 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
CCDC115-201ENST00000259229 ZBTB38Q8NAP3 1195 aaPredicted RBP22.13■■□□□ 1.13
CCDC115-201ENST00000259229 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
CCDC115-201ENST00000259229 CASZ1Q86V15 1759 aa22.13■■□□□ 1.13
CCDC115-201ENST00000259229 ADRA2BP18089 450 aa22.12■■□□□ 1.13
CCDC115-201ENST00000259229 ZNF827Q17R98 1081 aa22.12■■□□□ 1.13
CCDC115-201ENST00000259229 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
CCDC115-201ENST00000259229 USPL1Q5W0Q7 1092 aa22.12■■□□□ 1.13
CCDC115-201ENST00000259229 CDHR2Q9BYE9 1310 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 PHF14O94880 888 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 PDE4AP27815 886 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 SYNE4Q8N205 404 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 AKT1S1Q96B36 256 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
CCDC115-201ENST00000259229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
CCDC115-201ENST00000259229 SUSD4Q5VX71 490 aa22.1■■□□□ 1.13
CCDC115-201ENST00000259229 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
CCDC115-201ENST00000259229 SSFA2P28290 1259 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 TRAPPC3LQ5T215 181 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 CHD1LQ86WJ1 897 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 PLA2G12BQ9BX93 195 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
CCDC115-201ENST00000259229 EXOC6BQ9Y2D4 811 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 QSER1Q2KHR3 1735 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 NTSR2O95665 410 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 PARP10Q53GL7 1025 aa22.09■■□□□ 1.13
CCDC115-201ENST00000259229 RFX5P48382 616 aaPredicted RBP22.08■■□□□ 1.13
CCDC115-201ENST00000259229 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.13
CCDC115-201ENST00000259229 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.13
CCDC115-201ENST00000259229 EZH2Q15910 746 aaKnown RBP22.07■■□□□ 1.12
CCDC115-201ENST00000259229 LNPKQ9C0E8 428 aa22.07■■□□□ 1.12
CCDC115-201ENST00000259229 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
CCDC115-201ENST00000259229 NOP58Q9Y2X3 529 aaKnown RBP22.07■■□□□ 1.12
CCDC115-201ENST00000259229 ZPR1O75312 459 aa22.06■■□□□ 1.12
CCDC115-201ENST00000259229 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
CCDC115-201ENST00000259229 RGS3P49796 1198 aa22.06■■□□□ 1.12
CCDC115-201ENST00000259229 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
CCDC115-201ENST00000259229 LMBR1LQ6UX01 489 aa22.06■■□□□ 1.12
CCDC115-201ENST00000259229 RFC4P35249 363 aa22.06■■□□□ 1.12
CCDC115-201ENST00000259229 PA2G4Q9UQ80 394 aaKnown RBP22.06■■□□□ 1.12
CCDC115-201ENST00000259229 UTP14AQ9BVJ6 771 aaKnown RBP22.05■■□□□ 1.12
CCDC115-201ENST00000259229 LRP5O75197 1615 aa22.04■■□□□ 1.12
CCDC115-201ENST00000259229 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
CCDC115-201ENST00000259229 IRS4O14654 1257 aaPredicted RBP22.03■■□□□ 1.12
CCDC115-201ENST00000259229 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
CCDC115-201ENST00000259229 SURF6O75683 361 aaKnown RBP22.03■■□□□ 1.12
CCDC115-201ENST00000259229 CSF1RP07333 972 aa22.03■■□□□ 1.12
CCDC115-201ENST00000259229 ANO8Q9HCE9 1232 aaPredicted RBP22.03■■□□□ 1.12
CCDC115-201ENST00000259229 APBB1O00213 710 aa22.02■■□□□ 1.12
CCDC115-201ENST00000259229 GYS1P13807 737 aa22.02■■□□□ 1.12
CCDC115-201ENST00000259229 PTPN12Q05209 780 aaKnown RBP22.02■■□□□ 1.12
CCDC115-201ENST00000259229 KLHDC4Q8TBB5 520 aa22.02■■□□□ 1.12
CCDC115-201ENST00000259229 COPRSQ9NQ92 184 aa22.02■■□□□ 1.12
CCDC115-201ENST00000259229 FAM177BA6PVY3 158 aa22.02■■□□□ 1.11
CCDC115-201ENST00000259229 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.11
CCDC115-201ENST00000259229 TNRC6CQ9HCJ0 1690 aaKnown RBP22.01■■□□□ 1.11
CCDC115-201ENST00000259229 CTSWP56202 376 aa22.01■■□□□ 1.11
CCDC115-201ENST00000259229 BICDL1Q6ZP65 573 aa22.01■■□□□ 1.11
CCDC115-201ENST00000259229 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
CCDC115-201ENST00000259229 NUTM1Q86Y26 1132 aa22.01■■□□□ 1.11
CCDC115-201ENST00000259229 ABCC12Q96J65 1359 aa22.01■■□□□ 1.11
CCDC115-201ENST00000259229 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 PDE8AO60658 829 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 RAB11FIP3O75154 756 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 TTLL11Q8NHH1 800 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 LRRCC1Q9C099 1032 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 TFCP2L1Q9NZI6 479 aa22■■□□□ 1.11
CCDC115-201ENST00000259229 SALL3Q9BXA9 1300 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 BAG6P46379 1132 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 NFIXQ14938 502 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 FAM161AQ3B820 660 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 COL23A1Q86Y22 540 aaPredicted RBP21.99■■□□□ 1.11
CCDC115-201ENST00000259229 COL4A1P02462 1669 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
CCDC115-201ENST00000259229 HCLS1P14317 486 aaPredicted RBP21.98■■□□□ 1.11
CCDC115-201ENST00000259229 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
CCDC115-201ENST00000259229 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms