RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
TRA2B-201ENST00000259043 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
TRA2B-201ENST00000259043 ZNF417Q8TAU3 575 aa9.99□□□□□ -0.81
TRA2B-201ENST00000259043 TNFRSF25Q93038 417 aa9.99□□□□□ -0.81
TRA2B-201ENST00000259043 ZNF587Q96SQ5 575 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-201ENST00000259043 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
TRA2B-201ENST00000259043 COL9A3Q14050 684 aaPredicted RBP9.98□□□□□ -0.81
TRA2B-201ENST00000259043 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
TRA2B-201ENST00000259043 NEUROD4Q9HD90 331 aa9.98□□□□□ -0.81
TRA2B-201ENST00000259043 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
TRA2B-201ENST00000259043 DYRK3O43781 588 aa9.97□□□□□ -0.81
TRA2B-201ENST00000259043 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
TRA2B-201ENST00000259043 ZNF232Q9UNY5 417 aa9.97□□□□□ -0.81
TRA2B-201ENST00000259043 ATAD2Q6PL18 1390 aa9.97□□□□□ -0.81
TRA2B-201ENST00000259043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-201ENST00000259043 TRIM28Q13263 835 aaKnown RBP9.96□□□□□ -0.82
TRA2B-201ENST00000259043 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-201ENST00000259043 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-201ENST00000259043 C2orf49Q9BVC5 232 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-201ENST00000259043 C1orf115Q9H7X2 142 aa9.96□□□□□ -0.82
TRA2B-201ENST00000259043 STARD13Q9Y3M8 1113 aa9.96□□□□□ -0.82
TRA2B-201ENST00000259043 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 PPP1R12BO60237 982 aaPredicted RBP9.95□□□□□ -0.82
TRA2B-201ENST00000259043 LGR5O75473 907 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
TRA2B-201ENST00000259043 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 SCG3Q8WXD2 468 aaKnown RBP9.95□□□□□ -0.82
TRA2B-201ENST00000259043 SLC30A3Q99726 388 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
TRA2B-201ENST00000259043 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 ALBP02768 609 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 ELOAQ14241 798 aaKnown RBP9.94□□□□□ -0.82
TRA2B-201ENST00000259043 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 HINFPQ9BQA5 517 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 NOVA2Q9UNW9 492 aaKnown RBP9.94□□□□□ -0.82
TRA2B-201ENST00000259043 HCN4Q9Y3Q4 1203 aa9.94□□□□□ -0.82
TRA2B-201ENST00000259043 IGFBP4P22692 258 aa9.93□□□□□ -0.82
TRA2B-201ENST00000259043 ADH7P40394 386 aa9.93□□□□□ -0.82
TRA2B-201ENST00000259043 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
TRA2B-201ENST00000259043 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
TRA2B-201ENST00000259043 NID1P14543 1247 aa9.92□□□□□ -0.82
TRA2B-201ENST00000259043 WEE1P30291 646 aa9.92□□□□□ -0.82
TRA2B-201ENST00000259043 SPEM2Q0P670 501 aa9.92□□□□□ -0.82
TRA2B-201ENST00000259043 C8orf86Q6ZUL3 223 aa9.92□□□□□ -0.82
TRA2B-201ENST00000259043 CCDC97Q96F63 343 aaPredicted RBP9.92□□□□□ -0.82
TRA2B-201ENST00000259043 ZFP64Q9NPA5 681 aa9.92□□□□□ -0.82
TRA2B-201ENST00000259043 ATG7O95352 703 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 GRIK4Q16099 956 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 ARTNQ5T4W7 220 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 RHPN1Q8TCX5 695 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
TRA2B-201ENST00000259043 PRSS36Q5K4E3 855 aa9.9□□□□□ -0.82
TRA2B-201ENST00000259043 ALDH16A1Q8IZ83 802 aa9.9□□□□□ -0.82
TRA2B-201ENST00000259043 CCDC82Q8N4S0 544 aa9.9□□□□□ -0.82
TRA2B-201ENST00000259043 STK32AQ8WU08 396 aa9.9□□□□□ -0.82
TRA2B-201ENST00000259043 PBXIP1Q96AQ6 731 aa9.9□□□□□ -0.82
TRA2B-201ENST00000259043 KCNQ4P56696 695 aa9.89□□□□□ -0.83
TRA2B-201ENST00000259043 C20orf204Q6ZNR8 217 aa9.89□□□□□ -0.83
TRA2B-201ENST00000259043 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
TRA2B-201ENST00000259043 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
TRA2B-201ENST00000259043 ANKIB1Q9P2G1 1089 aa9.89□□□□□ -0.83
TRA2B-201ENST00000259043 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
TRA2B-201ENST00000259043 C9orf172C9J069 976 aa9.88□□□□□ -0.83
TRA2B-201ENST00000259043 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-201ENST00000259043 H2AFB1P0C5Y9 115 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 SWI5Q1ZZU3 235 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
TRA2B-201ENST00000259043 FOXO3O43524 673 aa9.86□□□□□ -0.83
TRA2B-201ENST00000259043 LILRB5O75023 590 aa9.86□□□□□ -0.83
TRA2B-201ENST00000259043 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
TRA2B-201ENST00000259043 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
TRA2B-201ENST00000259043 ELNP15502 786 aa9.85□□□□□ -0.83
TRA2B-201ENST00000259043 ADGRE1Q14246 886 aa9.85□□□□□ -0.83
TRA2B-201ENST00000259043 OCLNQ16625 522 aa9.85□□□□□ -0.83
TRA2B-201ENST00000259043 TMEM164Q5U3C3 297 aa9.85□□□□□ -0.83
TRA2B-201ENST00000259043 NBPF11Q86T75 865 aa9.84□□□□□ -0.83
TRA2B-201ENST00000259043 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
TRA2B-201ENST00000259043 A0A0A0MRY4 1105 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 SELPP16109 830 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 TYRO3Q06418 890 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 MBTPS1Q14703 1052 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 RTN1Q16799 776 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 QTRT2Q9H974 415 aaKnown RBP9.83□□□□□ -0.84
TRA2B-201ENST00000259043 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
TRA2B-201ENST00000259043 NRG1Q02297 640 aaPredicted RBP9.82□□□□□ -0.84
TRA2B-201ENST00000259043 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
TRA2B-201ENST00000259043 TXNRD3Q86VQ6 643 aa9.82□□□□□ -0.84
TRA2B-201ENST00000259043 BHMTQ93088 406 aa9.82□□□□□ -0.84
TRA2B-201ENST00000259043 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
TRA2B-201ENST00000259043 PRIMPOLQ96LW4 560 aa9.82□□□□□ -0.84
TRA2B-201ENST00000259043 SLAIN2Q9P270 581 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms