RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 ZGPATQ8N5A5 531 aaKnown RBP9.05□□□□□ -0.96
USPL1-201ENST00000255304 KCNH5Q8NCM2 988 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
USPL1-201ENST00000255304 USP25Q9UHP3 1055 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 NUCB1Q02818 461 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 COL16A1Q07092 1604 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 NBPF6Q5VWK0 638 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 NBPF4Q96M43 638 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 DBF4Q9UBU7 674 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 CCT2P78371 535 aaKnown RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 LARP1BQ659C4 914 aaKnown RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 KIF1BPQ96EK5 621 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.04□□□□□ -0.96
USPL1-201ENST00000255304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
USPL1-201ENST00000255304 V9GYY5 206 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 PNMA6EA0A0J9YXQ4 647 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 TTC39AQ5SRH9 613 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 CHST3Q7LGC8 479 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 HELBQ8NG08 1087 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 NOL7Q9UMY1 257 aaKnown RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
USPL1-201ENST00000255304 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 USP54Q70EL1 1684 aa9.04□□□□□ -0.96
USPL1-201ENST00000255304 ZBTB7BO15156 539 aaPredicted RBP9.03□□□□□ -0.96
USPL1-201ENST00000255304 HOXC9P31274 260 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 CCDC144CPQ8IYA2 1237 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 CCDC39Q9UFE4 941 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 GOLIM4O00461 696 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 NBPF7P0C2Y1 421 aaPredicted RBP9.03□□□□□ -0.96
USPL1-201ENST00000255304 PDE1AP54750 535 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 MPHOSPH8Q99549 860 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 KIF3AQ9Y496 699 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 GOLGA6L19H0YKK7 550 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 TNNT3P45378 269 aaPredicted RBP9.03□□□□□ -0.96
USPL1-201ENST00000255304 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
USPL1-201ENST00000255304 TTC22Q5TAA0 569 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 CEP85Q6P2H3 762 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 BLOC1S2Q6QNY1 142 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 NUP133Q8WUM0 1156 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 SIRT1Q96EB6 747 aa9.03□□□□□ -0.96
USPL1-201ENST00000255304 PRAMEF22A3QJZ6 481 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 BMP2KLQ5H9B9 411 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 CCAR2Q8N163 923 aaKnown RBP9.02□□□□□ -0.96
USPL1-201ENST00000255304 EDC3Q96F86 508 aaKnown RBP9.02□□□□□ -0.96
USPL1-201ENST00000255304 TMX1Q9H3N1 280 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 TMOD3Q9NYL9 352 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 ATP6V1DQ9Y5K8 247 aa9.02□□□□□ -0.96
USPL1-201ENST00000255304 PIK3R4Q99570 1358 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
USPL1-201ENST00000255304 JAG2Q9Y219 1238 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 METTL24Q5JXM2 366 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 SYNE3Q6ZMZ3 975 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 MTERF4Q7Z6M4 381 aaKnown RBP9.02□□□□□ -0.97
USPL1-201ENST00000255304 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
USPL1-201ENST00000255304 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.01□□□□□ -0.97
USPL1-201ENST00000255304 MSH6P52701 1360 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 HTATSF1O43719 755 aaKnown RBP9.01□□□□□ -0.97
USPL1-201ENST00000255304 NAA30Q147X3 362 aaPredicted RBP9.01□□□□□ -0.97
USPL1-201ENST00000255304 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 LMBR1LQ6UX01 489 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 ANKRD44Q8N8A2 993 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 TMEM51Q9NW97 253 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 MARCH6O60337 910 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 HDAC1Q13547 482 aaPredicted RBP9.01□□□□□ -0.97
USPL1-201ENST00000255304 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
USPL1-201ENST00000255304 TRMT112Q9UI30 125 aaKnown RBP9.01□□□□□ -0.97
USPL1-201ENST00000255304 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
USPL1-201ENST00000255304 ATP2B2Q01814 1243 aa9□□□□□ -0.97
USPL1-201ENST00000255304 CCDC158Q5M9N0 1113 aa9□□□□□ -0.97
USPL1-201ENST00000255304 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
USPL1-201ENST00000255304 BCL2L12Q9HB09 334 aa9□□□□□ -0.97
USPL1-201ENST00000255304 EDC4Q6P2E9 1401 aaKnown RBP9□□□□□ -0.97
USPL1-201ENST00000255304 CKAP2LQ8IYA6 745 aa9□□□□□ -0.97
USPL1-201ENST00000255304 SLAIN2Q9P270 581 aa9□□□□□ -0.97
USPL1-201ENST00000255304 FAM208AQ9UK61 1670 aaKnown RBP9□□□□□ -0.97
USPL1-201ENST00000255304 GLRX3O76003 335 aaKnown RBP9□□□□□ -0.97
USPL1-201ENST00000255304 PHF14O94880 888 aa9□□□□□ -0.97
USPL1-201ENST00000255304 NOLC1Q14978 699 aaKnown RBP eCLIP9□□□□□ -0.97
USPL1-201ENST00000255304 SMC5Q8IY18 1101 aa9□□□□□ -0.97
USPL1-201ENST00000255304 C19orf44Q9H6X5 657 aa9□□□□□ -0.97
USPL1-201ENST00000255304 TMEM63CQ9P1W3 806 aa9□□□□□ -0.97
USPL1-201ENST00000255304 ZSCAN21Q9Y5A6 473 aaPredicted RBP9□□□□□ -0.97
USPL1-201ENST00000255304 NSD2O96028 1365 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms