RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CBX8Q9HC52 389 aa18.71■□□□□ 0.59
SLC6A8-201ENST00000253122 VGLL3A8MV65 326 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 NAA30Q147X3 362 aaPredicted RBP18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 ZNF710Q8N1W2 664 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 MED14O60244 1454 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 NLRP6P59044 892 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 ANKRD1Q15327 319 aa18.7■□□□□ 0.58
SLC6A8-201ENST00000253122 RUFY3Q7L099 469 aa18.69■□□□□ 0.58
SLC6A8-201ENST00000253122 SGSM2O43147 1006 aa18.69■□□□□ 0.58
SLC6A8-201ENST00000253122 GTF2F1P35269 517 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■■□ 19.8
SLC6A8-201ENST00000253122 CEP57L1Q8IYX8 460 aa18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 CFAP45Q9UL16 551 aa18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 CPSF1Q10570 1443 aaKnown RBP18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 RBM8AQ9Y5S9 174 aaKnown RBP18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 UBXN4Q92575 508 aa18.68■□□□□ 0.58
SLC6A8-201ENST00000253122 GPS2Q13227 327 aa18.67■□□□□ 0.58
SLC6A8-201ENST00000253122 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
SLC6A8-201ENST00000253122 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
SLC6A8-201ENST00000253122 MTMR6Q9Y217 621 aa18.67■□□□□ 0.58
SLC6A8-201ENST00000253122 RAD50Q92878 1312 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 PDILTQ8N807 584 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 VIRMAQ69YN4 1812 aaKnown RBP18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 ZNF75DP51815 510 aa18.66■□□□□ 0.58
SLC6A8-201ENST00000253122 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 TIGD1Q96MW7 591 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 LRRC2Q9BYS8 371 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 PHF8Q9UPP1 1060 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 SOS1Q07889 1333 aaPredicted RBP18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 RGS12O14924 1447 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 BIN1O00499 593 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 NOL10Q9BSC4 688 aaKnown RBP18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 SFPQP23246 707 aaKnown RBP eCLIP18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 PSME1Q06323 249 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 ELF2Q15723 593 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 GTF3C6Q969F1 213 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 ADAMTSL3P82987 1691 aa18.65■□□□□ 0.58
SLC6A8-201ENST00000253122 URI1O94763 535 aaPredicted RBP18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 LARGE1O95461 756 aa18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 CREBRFQ8IUR6 639 aa18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 ZNF397Q8NF99 534 aaPredicted RBP18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 PHAXQ9H814 394 aaKnown RBP18.64■□□□□ 0.58
SLC6A8-201ENST00000253122 NPHP3Q7Z494 1330 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 HIP1O00291 1037 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 SNW1Q13573 536 aaKnown RBP18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 STK38Q15208 465 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 LARP1Q6PKG0 1096 aaKnown RBP18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 TMCO3Q6UWJ1 677 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 ZNF215Q9UL58 517 aaPredicted RBP18.64■□□□□ 0.57
SLC6A8-201ENST00000253122 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 TMX1Q9H3N1 280 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 ISM2Q6H9L7 571 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 ANO10Q9NW15 660 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 CPLX1O14810 134 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 ME3Q16798 604 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 SYNE3Q6ZMZ3 975 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 TMC6Q7Z403 805 aa18.63■□□□□ 0.57
SLC6A8-201ENST00000253122 USP6P35125 1406 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 SLU7O95391 586 aaKnown RBP18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 FSIP1Q8NA03 581 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 NEUROD6Q96NK8 337 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 SERPINC1P01008 464 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 CCT2P78371 535 aaKnown RBP18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 PTH1RQ03431 593 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 BRF1Q92994 677 aa18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 ZNF396Q96N95 335 aaPredicted RBP18.62■□□□□ 0.57
SLC6A8-201ENST00000253122 NCBP1Q09161 790 aaKnown RBP18.61■□□□□ 0.57
SLC6A8-201ENST00000253122 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
SLC6A8-201ENST00000253122 ERCC4Q92889 916 aaPredicted RBP18.61■□□□□ 0.57
SLC6A8-201ENST00000253122 KCNF1Q9H3M0 494 aa18.61■□□□□ 0.57
SLC6A8-201ENST00000253122 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
SLC6A8-201ENST00000253122 STX1AQ16623 288 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms