RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 CDK5RAP3Q96JB5 506 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 USP6P35125 1406 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 IQCA1Q86XH1 822 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 SSFA2P28290 1259 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
ACTN4-201ENST00000252699 IFIT3O14879 490 aaKnown RBP20.02■□□□□ 0.8
ACTN4-201ENST00000252699 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 HMG20BQ9P0W2 317 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 CLTCL1P53675 1640 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 CCDC82Q8N4S0 544 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 IQSEC3Q9UPP2 1182 aaPredicted RBP20.02■□□□□ 0.8
ACTN4-201ENST00000252699 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.8
ACTN4-201ENST00000252699 KIAA0232Q92628 1395 aa20.02■□□□□ 0.79
ACTN4-201ENST00000252699 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.79
ACTN4-201ENST00000252699 CEP89Q96ST8 783 aa20.02■□□□□ 0.79
ACTN4-201ENST00000252699 ZFYP08048 801 aaPredicted RBP20.01■□□□□ 0.79
ACTN4-201ENST00000252699 UNC13BO14795 1591 aa20.01■□□□□ 0.79
ACTN4-201ENST00000252699 A2ML1A8K2U0 1454 aa20.01■□□□□ 0.79
ACTN4-201ENST00000252699 CCT2P78371 535 aaKnown RBP20.01■□□□□ 0.79
ACTN4-201ENST00000252699 RTCBQ9Y3I0 505 aaKnown RBP20.01■□□□□ 0.79
ACTN4-201ENST00000252699 GOLGA8BA8MQT2 603 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
ACTN4-201ENST00000252699 HOMER1Q86YM7 354 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 FAM89AQ96GI7 184 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 ABCA9Q8IUA7 1624 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 HMGN5P82970 282 aaKnown RBP20■□□□□ 0.79
ACTN4-201ENST00000252699 SLC12A7Q9Y666 1083 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 ST5P78524 1137 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 TFCP2Q12800 502 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 ARHGEF25Q86VW2 580 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 C8orf76Q96K31 380 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 FAM13BQ9NYF5 915 aa20■□□□□ 0.79
ACTN4-201ENST00000252699 KCNQ3O43525 872 aa19.99■□□□□ 0.79
ACTN4-201ENST00000252699 LDHCP07864 332 aa19.99■□□□□ 0.79
ACTN4-201ENST00000252699 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 RBM8AQ9Y5S9 174 aaKnown RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 GUCY1B3Q02153 619 aa19.99■□□□□ 0.79
ACTN4-201ENST00000252699 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
ACTN4-201ENST00000252699 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 CCAR2Q8N163 923 aaKnown RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 CRACR2BQ8N4Y2 399 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 CTCFLQ8NI51 663 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-201ENST00000252699 SLF2Q8IX21 1173 aa19.98■□□□□ 0.79
ACTN4-201ENST00000252699 DNAJC10Q8IXB1 793 aa19.98■□□□□ 0.79
ACTN4-201ENST00000252699 NOC3LQ8WTT2 800 aaKnown RBP19.98■□□□□ 0.79
ACTN4-201ENST00000252699 TNPO1Q92973 898 aaKnown RBP19.98■□□□□ 0.79
ACTN4-201ENST00000252699 MPHOSPH10O00566 681 aaKnown RBP19.98■□□□□ 0.79
ACTN4-201ENST00000252699 NBPF7P0C2Y1 421 aaPredicted RBP19.98■□□□□ 0.79
ACTN4-201ENST00000252699 NUP62CLQ9H1M0 184 aa19.98■□□□□ 0.79
ACTN4-201ENST00000252699 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
ACTN4-201ENST00000252699 MCMDC2Q4G0Z9 681 aa19.98■□□□□ 0.79
ACTN4-201ENST00000252699 ZNF622Q969S3 477 aaKnown RBP eCLIP19.98■□□□□ 0.799e-9■□□□□ 11
ACTN4-201ENST00000252699 PHKG2P15735 406 aa19.97■□□□□ 0.79
ACTN4-201ENST00000252699 MAP3K4Q9Y6R4 1608 aa19.97■□□□□ 0.79
ACTN4-201ENST00000252699 OTUD7AQ8TE49 926 aaPredicted RBP19.97■□□□□ 0.79
ACTN4-201ENST00000252699 PAG1Q9NWQ8 432 aa19.97■□□□□ 0.79
ACTN4-201ENST00000252699 CCDC39Q9UFE4 941 aa19.97■□□□□ 0.79
ACTN4-201ENST00000252699 TCEANC2Q96MN5 208 aa19.97■□□□□ 0.79
ACTN4-201ENST00000252699 GIGYF1O75420 1035 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-201ENST00000252699 SMC2O95347 1197 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 SCAND2PQ9GZW5 306 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-201ENST00000252699 ANAPC15P60006 121 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 SPTY2D1Q68D10 685 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-201ENST00000252699 TMX3Q96JJ7 454 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 GOLGA8AA7E2F4 631 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 NMIQ13287 307 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-201ENST00000252699 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
ACTN4-201ENST00000252699 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 NCOA7Q8NI08 942 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 NYXQ9GZU5 481 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 PDILTQ8N807 584 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 USP16Q9Y5T5 823 aa19.96■□□□□ 0.79
ACTN4-201ENST00000252699 BAG3O95817 575 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 PDE4CQ08493 712 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 GRPEL1Q9HAV7 217 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 TMEM67Q5HYA8 995 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 KLHDC4Q8TBB5 520 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 BRF1Q92994 677 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 GJB2P29033 226 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 MFSD6Q6ZSS7 791 aa19.95■□□□□ 0.78
ACTN4-201ENST00000252699 GNPATO15228 680 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 CYP7A1P22680 504 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 KDM2BQ8NHM5 1336 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 SEC24BO95487 1268 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 FAM43AQ8N2R8 423 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
ACTN4-201ENST00000252699 KRT18P05783 430 aaKnown RBP19.94■□□□□ 0.78
ACTN4-201ENST00000252699 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
ACTN4-201ENST00000252699 CHMLP26374 656 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 GCKRQ14397 625 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 STX6O43752 255 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 MICU3Q86XE3 530 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 SH3TC1Q8TE82 1336 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 EYA2O00167 538 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 TIMM10P62072 90 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 SUCLG2Q96I99 432 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms