RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 ERC1Q8IUD2 1116 aa21.27■□□□□ 0.99
PCCB-201ENST00000251654 CCDC87Q9NVE4 849 aa21.27■□□□□ 0.99
PCCB-201ENST00000251654 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
PCCB-201ENST00000251654 CRKLP46109 303 aaKnown RBP21.26■□□□□ 0.99
PCCB-201ENST00000251654 EIF5P55010 431 aaKnown RBP21.26■□□□□ 0.99
PCCB-201ENST00000251654 HLFQ16534 295 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 NUTM1Q86Y26 1132 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 KLHDC4Q8TBB5 520 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 DDRGK1Q96HY6 314 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 TRPC5Q9UL62 973 aaPredicted RBP21.25■□□□□ 0.99
PCCB-201ENST00000251654 SASH1O94885 1247 aa21.25■□□□□ 0.99
PCCB-201ENST00000251654 PTPN12Q05209 780 aaKnown RBP21.24■□□□□ 0.99
PCCB-201ENST00000251654 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
PCCB-201ENST00000251654 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
PCCB-201ENST00000251654 LMBR1LQ6UX01 489 aa21.23■□□□□ 0.99
PCCB-201ENST00000251654 DZIP3Q86Y13 1208 aaKnown RBP21.23■□□□□ 0.99
PCCB-201ENST00000251654 ARXQ96QS3 562 aa21.23■□□□□ 0.99
PCCB-201ENST00000251654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.23■□□□□ 0.99
PCCB-201ENST00000251654 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
PCCB-201ENST00000251654 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.994e-6■■■□□ 16.9
PCCB-201ENST00000251654 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 CLASRPQ8N2M8 674 aaKnown RBP21.22■□□□□ 0.99
PCCB-201ENST00000251654 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 C22orf23Q9BZE7 217 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 SIL1Q9H173 461 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 FAM182BQ5T319 152 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
PCCB-201ENST00000251654 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
PCCB-201ENST00000251654 PCCAP05165 728 aaPredicted RBP21.21■□□□□ 0.99
PCCB-201ENST00000251654 NLRP10Q86W26 655 aa21.21■□□□□ 0.99
PCCB-201ENST00000251654 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
PCCB-201ENST00000251654 LY75O60449 1722 aa21.2■□□□□ 0.98
PCCB-201ENST00000251654 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
PCCB-201ENST00000251654 TTC41PQ6P2S7 1318 aa21.19■□□□□ 0.98
PCCB-201ENST00000251654 GPTP24298 496 aa21.19■□□□□ 0.98
PCCB-201ENST00000251654 RBM25P49756 843 aaKnown RBP21.19■□□□□ 0.98
PCCB-201ENST00000251654 MYH3P11055 1940 aa21.19■□□□□ 0.98
PCCB-201ENST00000251654 SEPT12Q8IYM1 358 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 FAM89AQ96GI7 184 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 PLA2G12BQ9BX93 195 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 UBN2Q6ZU65 1347 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 CDHR2Q9BYE9 1310 aa21.18■□□□□ 0.98
PCCB-201ENST00000251654 EAF2Q96CJ1 260 aaPredicted RBP21.18■□□□□ 0.98
PCCB-201ENST00000251654 AACSQ86V21 672 aa21.17■□□□□ 0.98
PCCB-201ENST00000251654 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
PCCB-201ENST00000251654 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
PCCB-201ENST00000251654 CAMTA2O94983 1202 aa21.16■□□□□ 0.98
PCCB-201ENST00000251654 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
PCCB-201ENST00000251654 TAF1LQ8IZX4 1826 aa21.16■□□□□ 0.98
PCCB-201ENST00000251654 IFIT2P09913 472 aaKnown RBP21.15■□□□□ 0.98
PCCB-201ENST00000251654 CASC1Q6TDU7 716 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 ECHDC1Q9NTX5 307 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 BRWD3Q6RI45 1802 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 CNTNAP4Q9C0A0 1308 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 EIF5BO60841 1220 aaKnown RBP21.15■□□□□ 0.98
PCCB-201ENST00000251654 KCNQ4P56696 695 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 SYNE4Q8N205 404 aa21.15■□□□□ 0.98
PCCB-201ENST00000251654 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
PCCB-201ENST00000251654 GLRX3O76003 335 aaKnown RBP21.14■□□□□ 0.97
PCCB-201ENST00000251654 CSF1RP07333 972 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 RILPL2Q969X0 211 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 TLR7Q9NYK1 1049 aaKnown RBP21.13■□□□□ 0.97
PCCB-201ENST00000251654 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 TFCP2Q12800 502 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 ATG9AQ7Z3C6 839 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 GPATCH3Q96I76 525 aa21.13■□□□□ 0.97
PCCB-201ENST00000251654 ERC2O15083 957 aa21.12■□□□□ 0.97
PCCB-201ENST00000251654 CHMLP26374 656 aa21.11■□□□□ 0.97
PCCB-201ENST00000251654 CCDC8Q9H0W5 538 aaPredicted RBP21.11■□□□□ 0.97
PCCB-201ENST00000251654 TRMT112Q9UI30 125 aaKnown RBP21.11■□□□□ 0.97
PCCB-201ENST00000251654 SLC4A3P48751 1232 aa21.11■□□□□ 0.97
PCCB-201ENST00000251654 TNNI3KQ59H18 835 aa21.11■□□□□ 0.97
PCCB-201ENST00000251654 KIF2CQ99661 725 aa21.11■□□□□ 0.97
PCCB-201ENST00000251654 FPGT-TNNI3KV9GXZ4 949 aa21.11■□□□□ 0.97
PCCB-201ENST00000251654 MAP4K4O95819 1239 aaPredicted RBP21.1■□□□□ 0.97
PCCB-201ENST00000251654 ZNF594Q96JF6 807 aaPredicted RBP21.1■□□□□ 0.97
PCCB-201ENST00000251654 LAMB2P55268 1798 aa21.1■□□□□ 0.97
PCCB-201ENST00000251654 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
PCCB-201ENST00000251654 EYA2O00167 538 aa21.09■□□□□ 0.97
PCCB-201ENST00000251654 IRS4O14654 1257 aaPredicted RBP21.09■□□□□ 0.97
PCCB-201ENST00000251654 CIAO1O76071 339 aa21.09■□□□□ 0.97
PCCB-201ENST00000251654 RC3H1Q5TC82 1133 aaKnown RBP21.09■□□□□ 0.97
PCCB-201ENST00000251654 TTLL11Q8NHH1 800 aa21.09■□□□□ 0.97
PCCB-201ENST00000251654 USP26Q9BXU7 913 aa21.09■□□□□ 0.97
PCCB-201ENST00000251654 DBNLQ9UJU6 430 aaKnown RBP21.09■□□□□ 0.97
PCCB-201ENST00000251654 IL15P40933 162 aaPredicted RBP21.08■□□□□ 0.97
PCCB-201ENST00000251654 CTSWP56202 376 aa21.08■□□□□ 0.97
PCCB-201ENST00000251654 CCDC57Q2TAC2 916 aa21.08■□□□□ 0.97
PCCB-201ENST00000251654 CNTROBQ8N137 903 aa21.08■□□□□ 0.97
PCCB-201ENST00000251654 ESYT1Q9BSJ8 1104 aa21.08■□□□□ 0.97
PCCB-201ENST00000251654 CCNL1Q9UK58 526 aaPredicted RBP21.08■□□□□ 0.97
PCCB-201ENST00000251654 REC8O95072 547 aa21.08■□□□□ 0.96
PCCB-201ENST00000251654 LRRC24Q50LG9 513 aa21.08■□□□□ 0.96
PCCB-201ENST00000251654 SUSD4Q5VX71 490 aa21.08■□□□□ 0.96
PCCB-201ENST00000251654 BCL11BQ9C0K0 894 aaPredicted RBP21.08■□□□□ 0.96
PCCB-201ENST00000251654 C4BP0C0L5 1744 aa21.07■□□□□ 0.96
PCCB-201ENST00000251654 PARP10Q53GL7 1025 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms