RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 PKP1Q13835 747 aa30.48■■■□□ 2.47
TMEM55B-201ENST00000250489 TJP1Q07157 1748 aa30.47■■■□□ 2.47
TMEM55B-201ENST00000250489 BTG4Q9NY30 223 aa30.47■■■□□ 2.47
TMEM55B-201ENST00000250489 TMOD3Q9NYL9 352 aa30.47■■■□□ 2.47
TMEM55B-201ENST00000250489 SKOR2Q2VWA4 1001 aaPredicted RBP30.46■■■□□ 2.47
TMEM55B-201ENST00000250489 CWC25Q9NXE8 425 aaPredicted RBP30.46■■■□□ 2.47
TMEM55B-201ENST00000250489 GOLGA6L22H0YM25 854 aa30.45■■■□□ 2.47
TMEM55B-201ENST00000250489 HIP1O00291 1037 aa30.45■■■□□ 2.46
TMEM55B-201ENST00000250489 FOXO4P98177 505 aa30.44■■■□□ 2.46
TMEM55B-201ENST00000250489 L1TD1Q5T7N2 865 aaKnown RBP30.44■■■□□ 2.46
TMEM55B-201ENST00000250489 RASEFQ8IZ41 740 aa30.44■■■□□ 2.46
TMEM55B-201ENST00000250489 INTS4Q96HW7 963 aaKnown RBP30.44■■■□□ 2.46
TMEM55B-201ENST00000250489 BOLA2Q9H3K6 86 aa30.44■■■□□ 2.46
TMEM55B-201ENST00000250489 COL14A1Q05707 1796 aaKnown RBP30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 FSD2A1L4K1 749 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 TFCP2Q12800 502 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 LMBR1LQ6UX01 489 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 ZDHHC9Q9Y397 364 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 TNNI3KQ59H18 835 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 NOL8Q76FK4 1167 aaKnown RBP30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 ZBTB3Q9H5J0 574 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 BRPF3Q9ULD4 1205 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 FPGT-TNNI3KV9GXZ4 949 aa30.43■■■□□ 2.46
TMEM55B-201ENST00000250489 PTH1RQ03431 593 aa30.42■■■□□ 2.46
TMEM55B-201ENST00000250489 DISP2A7MBM2 1401 aa30.41■■■□□ 2.46
TMEM55B-201ENST00000250489 CCDC191Q8NCU4 936 aa30.41■■■□□ 2.46
TMEM55B-201ENST00000250489 DBNLQ9UJU6 430 aaKnown RBP30.41■■■□□ 2.46
TMEM55B-201ENST00000250489 NMIQ13287 307 aaPredicted RBP30.4■■■□□ 2.46
TMEM55B-201ENST00000250489 TTC14Q96N46 770 aa30.4■■■□□ 2.46
TMEM55B-201ENST00000250489 SNRKQ9NRH2 765 aa30.4■■■□□ 2.46
TMEM55B-201ENST00000250489 GOLGA6L3A6NEY3 463 aa30.39■■■□□ 2.46
TMEM55B-201ENST00000250489 PIGBQ92521 554 aa30.39■■■□□ 2.46
TMEM55B-201ENST00000250489 KCNB2Q92953 911 aa30.39■■■□□ 2.46
TMEM55B-201ENST00000250489 FAM227BQ96M60 508 aa30.39■■■□□ 2.46
TMEM55B-201ENST00000250489 CCDC171Q6TFL3 1326 aa30.38■■■□□ 2.45
TMEM55B-201ENST00000250489 ATP5JP18859 108 aa30.38■■■□□ 2.45
TMEM55B-201ENST00000250489 FSD1Q9BTV5 496 aa30.38■■■□□ 2.45
TMEM55B-201ENST00000250489 ROBO1Q9Y6N7 1651 aa30.38■■■□□ 2.45
TMEM55B-201ENST00000250489 VSIG10Q8N0Z9 540 aa30.37■■■□□ 2.45
TMEM55B-201ENST00000250489 ASAP1Q9ULH1 1129 aa30.37■■■□□ 2.45
TMEM55B-201ENST00000250489 MCTP1Q6DN14 999 aa30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 TEX13AQ9BXU3 409 aaPredicted RBP30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 CHMP3Q9Y3E7 222 aa30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 COL22A1Q8NFW1 1626 aaPredicted RBP30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 ITGB4P16144 1822 aa30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 AHDC1Q5TGY3 1603 aaPredicted RBP30.36■■■□□ 2.45
TMEM55B-201ENST00000250489 COL16A1Q07092 1604 aaPredicted RBP30.35■■■□□ 2.45
TMEM55B-201ENST00000250489 PRPF40BQ6NWY9 871 aaKnown RBP30.35■■■□□ 2.45
TMEM55B-201ENST00000250489 DNAJC10Q8IXB1 793 aa30.35■■■□□ 2.45
TMEM55B-201ENST00000250489 ISCA1Q9BUE6 129 aa30.35■■■□□ 2.45
TMEM55B-201ENST00000250489 ATG3Q9NT62 314 aa30.35■■■□□ 2.45
TMEM55B-201ENST00000250489 PLCH1Q4KWH8 1693 aa30.34■■■□□ 2.45
TMEM55B-201ENST00000250489 A0A0D9SFI3 127 aa30.34■■■□□ 2.45
TMEM55B-201ENST00000250489 NECTIN1Q15223 517 aa30.34■■■□□ 2.45
TMEM55B-201ENST00000250489 MED23Q9ULK4 1368 aa30.33■■■□□ 2.45
TMEM55B-201ENST00000250489 AK2P54819 239 aa30.33■■■□□ 2.45
TMEM55B-201ENST00000250489 MAP4K1Q92918 833 aa30.33■■■□□ 2.45
TMEM55B-201ENST00000250489 DBNDD2Q9BQY9 259 aa30.33■■■□□ 2.45
TMEM55B-201ENST00000250489 ATG9AQ7Z3C6 839 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 TM6SF1Q9BZW5 370 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 RBM8AQ9Y5S9 174 aaKnown RBP30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 BRD1O95696 1058 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 CASTP20810 708 aaKnown RBP30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 TCIRG1Q13488 830 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 KLHL40Q2TBA0 621 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 LRP6O75581 1613 aa30.32■■■□□ 2.44
TMEM55B-201ENST00000250489 EDC3Q96F86 508 aaKnown RBP30.31■■■□□ 2.44
TMEM55B-201ENST00000250489 LMBRD1Q9NUN5 540 aa30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 ADCK5Q3MIX3 580 aa30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 RUFY3Q7L099 469 aa30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 JAKMIP1Q96N16 626 aaKnown RBP30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 ISY1Q9ULR0 285 aaKnown RBP30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 RFX7Q2KHR2 1363 aa30.3■■■□□ 2.44
TMEM55B-201ENST00000250489 BCL9O00512 1426 aa30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 CREB3L3Q68CJ9 461 aa30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 ZSWIM6Q9HCJ5 1215 aa30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 GPR108Q9NPR9 543 aa30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 LIMCH1Q9UPQ0 1083 aa30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 DDX49Q9Y6V7 483 aaKnown RBP30.29■■■□□ 2.44
TMEM55B-201ENST00000250489 JCADQ9P266 1359 aa30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 STARD3NLO95772 234 aa30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 XRCC6P12956 609 aaKnown RBP eCLIP30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 TRIM28Q13263 835 aaKnown RBP30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 ZNF330Q9Y3S2 320 aaPredicted RBP30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 CPA1P15085 419 aa30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 IL15P40933 162 aaPredicted RBP30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 KIF6Q6ZMV9 814 aa30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 HAUS7Q99871 368 aa30.28■■■□□ 2.44
TMEM55B-201ENST00000250489 WNK3Q9BYP7 1800 aa30.27■■■□□ 2.44
TMEM55B-201ENST00000250489 ZKSCAN1P17029 563 aaPredicted RBP30.27■■■□□ 2.44
TMEM55B-201ENST00000250489 VPS53Q5VIR6 699 aa30.27■■■□□ 2.44
TMEM55B-201ENST00000250489 ARXQ96QS3 562 aa30.27■■■□□ 2.44
TMEM55B-201ENST00000250489 KCNJ4P48050 445 aa30.26■■■□□ 2.44
TMEM55B-201ENST00000250489 EYA2O00167 538 aa30.26■■■□□ 2.43
TMEM55B-201ENST00000250489 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.26■■■□□ 2.43
TMEM55B-201ENST00000250489 ZNF589Q86UQ0 364 aaPredicted RBP30.25■■■□□ 2.43
TMEM55B-201ENST00000250489 PDRG1Q9NUG6 133 aa30.25■■■□□ 2.43
TMEM55B-201ENST00000250489 CYP46A1Q9Y6A2 500 aa30.25■■■□□ 2.43
TMEM55B-201ENST00000250489 SLC27A2O14975 620 aa30.24■■■□□ 2.43
TMEM55B-201ENST00000250489 CIAO1O76071 339 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms