RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
LRRC4-201ENST00000249363 UBN2Q6ZU65 1347 aa11.51□□□□□ -0.57
LRRC4-201ENST00000249363 GRM8O00222 908 aa11.5□□□□□ -0.57
LRRC4-201ENST00000249363 DZIP3Q86Y13 1208 aaKnown RBP11.5□□□□□ -0.57
LRRC4-201ENST00000249363 CCDC191Q8NCU4 936 aa11.5□□□□□ -0.57
LRRC4-201ENST00000249363 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
LRRC4-201ENST00000249363 RPAP2Q8IXW5 612 aaPredicted RBP11.5□□□□□ -0.57
LRRC4-201ENST00000249363 GNAI2P04899 355 aa11.49□□□□□ -0.57
LRRC4-201ENST00000249363 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
LRRC4-201ENST00000249363 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
LRRC4-201ENST00000249363 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
LRRC4-201ENST00000249363 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
LRRC4-201ENST00000249363 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
LRRC4-201ENST00000249363 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
LRRC4-201ENST00000249363 LRRFIP2Q9Y608 721 aaKnown RBP11.49□□□□□ -0.57
LRRC4-201ENST00000249363 COL4A1P02462 1669 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 SSH3Q8TE77 659 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 NARFQ9UHQ1 456 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 A0A087WZG4 1122 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 PLA2G12BQ9BX93 195 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 ATP5J2-PTCD1G3V325 749 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 FOXO4P98177 505 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 ZNF827Q17R98 1081 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 SMIM5Q71RC9 77 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
LRRC4-201ENST00000249363 USP42Q9H9J4 1324 aaKnown RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 APBA3O96018 575 aa11.47□□□□□ -0.57
LRRC4-201ENST00000249363 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 DCTPP1Q9H773 170 aa11.47□□□□□ -0.57
LRRC4-201ENST00000249363 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 CWC25Q9NXE8 425 aaPredicted RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 HSP90AB3PQ58FF7 597 aa11.47□□□□□ -0.57
LRRC4-201ENST00000249363 RWDD1Q9H446 243 aaPredicted RBP11.47□□□□□ -0.57
LRRC4-201ENST00000249363 SSFA2P28290 1259 aa11.46□□□□□ -0.57
LRRC4-201ENST00000249363 GNPATO15228 680 aa11.46□□□□□ -0.57
LRRC4-201ENST00000249363 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.57
LRRC4-201ENST00000249363 SPEF2Q9C093 1822 aa11.46□□□□□ -0.57
LRRC4-201ENST00000249363 RIC1Q4ADV7 1423 aa11.46□□□□□ -0.58
LRRC4-201ENST00000249363 NTSR2O95665 410 aa11.45□□□□□ -0.58
LRRC4-201ENST00000249363 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
LRRC4-201ENST00000249363 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
LRRC4-201ENST00000249363 ARAP2Q8WZ64 1704 aa11.45□□□□□ -0.58
LRRC4-201ENST00000249363 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
LRRC4-201ENST00000249363 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
LRRC4-201ENST00000249363 CSF1RP07333 972 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
LRRC4-201ENST00000249363 NUCB1Q02818 461 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 GCC1Q96CN9 775 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
LRRC4-201ENST00000249363 PPP1R42Q7Z4L9 355 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
LRRC4-201ENST00000249363 TAF1P21675 1872 aa11.44□□□□□ -0.58
LRRC4-201ENST00000249363 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 EZH2Q15910 746 aaKnown RBP11.43□□□□□ -0.58
LRRC4-201ENST00000249363 UBE3BQ7Z3V4 1068 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 AK7Q96M32 723 aa11.43□□□□□ -0.58
LRRC4-201ENST00000249363 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
LRRC4-201ENST00000249363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
LRRC4-201ENST00000249363 GYS1P13807 737 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 PDE4AP27815 886 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 ZNF330Q9Y3S2 320 aaPredicted RBP11.42□□□□□ -0.58
LRRC4-201ENST00000249363 SALL3Q9BXA9 1300 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 RTL9Q8NET4 1388 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 TM4SF1P30408 202 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 JARID2Q92833 1246 aaPredicted RBP11.42□□□□□ -0.58
LRRC4-201ENST00000249363 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
LRRC4-201ENST00000249363 EN1Q05925 392 aaPredicted RBP11.42□□□□□ -0.58
LRRC4-201ENST00000249363 SKAP1Q86WV1 359 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
LRRC4-201ENST00000249363 DSG3P32926 999 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 HDAC5Q9UQL6 1122 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 GPTP24298 496 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
LRRC4-201ENST00000249363 COL23A1Q86Y22 540 aaPredicted RBP11.4□□□□□ -0.58
LRRC4-201ENST00000249363 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
LRRC4-201ENST00000249363 ABCC12Q96J65 1359 aa11.4□□□□□ -0.58
LRRC4-201ENST00000249363 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
LRRC4-201ENST00000249363 PTPN12Q05209 780 aaKnown RBP11.4□□□□□ -0.58
LRRC4-201ENST00000249363 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
LRRC4-201ENST00000249363 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms