RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GCKRQ14397 625 aa21.07■□□□□ 0.96
CDKN1A-201ENST00000244741 NFKBIBQ15653 356 aa21.07■□□□□ 0.96
CDKN1A-201ENST00000244741 SMC5Q8IY18 1101 aa21.07■□□□□ 0.96
CDKN1A-201ENST00000244741 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
CDKN1A-201ENST00000244741 NARFQ9UHQ1 456 aa21.07■□□□□ 0.96
CDKN1A-201ENST00000244741 CCDC125Q86Z20 511 aa21.06■□□□□ 0.96
CDKN1A-201ENST00000244741 NUP98P52948 1817 aa21.06■□□□□ 0.96
CDKN1A-201ENST00000244741 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
CDKN1A-201ENST00000244741 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
CDKN1A-201ENST00000244741 ALDH1L1O75891 902 aa21.05■□□□□ 0.96
CDKN1A-201ENST00000244741 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDKN1A-201ENST00000244741 UBN2Q6ZU65 1347 aa21.05■□□□□ 0.96
CDKN1A-201ENST00000244741 SSFA2P28290 1259 aa21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 CWC25Q9NXE8 425 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 UBTFL1P0CB47 393 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 TBC1D9BQ66K14 1250 aa21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 UBE3BQ7Z3V4 1068 aa21.04■□□□□ 0.96
CDKN1A-201ENST00000244741 GRM8O00222 908 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 LRRFIP2Q9Y608 721 aaKnown RBP21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 C4AP0C0L4 1744 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 NLRP10Q86W26 655 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 TBC1D32Q96NH3 1257 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 STK32BQ9NY57 414 aa21.03■□□□□ 0.96
CDKN1A-201ENST00000244741 PNPLA7Q6ZV29 1317 aa21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 FAM89AQ96GI7 184 aa21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 PDGFDQ9GZP0 370 aaPredicted RBP21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 ZNF652Q9Y2D9 606 aa21.02■□□□□ 0.96
CDKN1A-201ENST00000244741 ADRA2BP18089 450 aa21.02■□□□□ 0.95
CDKN1A-201ENST00000244741 HSP90AB3PQ58FF7 597 aa21.02■□□□□ 0.95
CDKN1A-201ENST00000244741 CCDC191Q8NCU4 936 aa21.02■□□□□ 0.95
CDKN1A-201ENST00000244741 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
CDKN1A-201ENST00000244741 N4BP2Q86UW6 1770 aaPredicted RBP21.01■□□□□ 0.95
CDKN1A-201ENST00000244741 GNAI3P08754 354 aa21.01■□□□□ 0.95
CDKN1A-201ENST00000244741 SUSD4Q5VX71 490 aa21■□□□□ 0.95
CDKN1A-201ENST00000244741 GNAI2P04899 355 aa21■□□□□ 0.95
CDKN1A-201ENST00000244741 GYS1P13807 737 aa21■□□□□ 0.95
CDKN1A-201ENST00000244741 SUCLG2Q96I99 432 aa21■□□□□ 0.95
CDKN1A-201ENST00000244741 CLEC4GQ6UXB4 293 aa20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 TRMT112Q9UI30 125 aaKnown RBP20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 BCORQ6W2J9 1755 aa20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 NUCB1Q02818 461 aa20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 MSL1Q68DK7 614 aa20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
CDKN1A-201ENST00000244741 TRIM28Q13263 835 aaKnown RBP20.98■□□□□ 0.95
CDKN1A-201ENST00000244741 BECN1Q14457 450 aa20.98■□□□□ 0.95
CDKN1A-201ENST00000244741 CCDC24Q8N4L8 307 aa20.98■□□□□ 0.95
CDKN1A-201ENST00000244741 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
CDKN1A-201ENST00000244741 HMGB2P26583 209 aaKnown RBP20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 EPHA10Q5JZY3 1008 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 KAZALD1Q96I82 304 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 H7C1W4 665 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 SETDB2Q96T68 719 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 ANKRD36CQ5JPF3 1778 aa20.97■□□□□ 0.95
CDKN1A-201ENST00000244741 CASP7P55210 303 aa20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 NFIXQ14938 502 aa20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 BICC1Q9H694 974 aaKnown RBP20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 CEP85Q6P2H3 762 aa20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 UTYO14607 1347 aa20.96■□□□□ 0.95
CDKN1A-201ENST00000244741 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
CDKN1A-201ENST00000244741 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
CDKN1A-201ENST00000244741 PNMA6EA0A0J9YXQ4 647 aa20.95■□□□□ 0.94
CDKN1A-201ENST00000244741 UTP14AQ9BVJ6 771 aaKnown RBP20.95■□□□□ 0.94
CDKN1A-201ENST00000244741 LNPKQ9C0E8 428 aa20.95■□□□□ 0.94
CDKN1A-201ENST00000244741 HCLS1P14317 486 aaPredicted RBP20.94■□□□□ 0.94
CDKN1A-201ENST00000244741 CHD1LQ86WJ1 897 aa20.94■□□□□ 0.94
CDKN1A-201ENST00000244741 FRAT2O75474 233 aaPredicted RBP20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 FLAD1Q8NFF5 587 aa20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 NTSR2O95665 410 aa20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 PARP10Q53GL7 1025 aa20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
CDKN1A-201ENST00000244741 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 IRS4O14654 1257 aaPredicted RBP20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 NPHP1O15259 732 aa20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 GTF2E1P29083 439 aaPredicted RBP20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 ERFEQ4G0M1 354 aa20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 CHMP3Q9Y3E7 222 aa20.92■□□□□ 0.94
CDKN1A-201ENST00000244741 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
CDKN1A-201ENST00000244741 ANKRD44Q8N8A2 993 aa20.91■□□□□ 0.94
CDKN1A-201ENST00000244741 TBC1D2Q9BYX2 928 aa20.91■□□□□ 0.94
CDKN1A-201ENST00000244741 SH3TC1Q8TE82 1336 aa20.91■□□□□ 0.94
CDKN1A-201ENST00000244741 SRGAP3O43295 1099 aa20.9■□□□□ 0.94
CDKN1A-201ENST00000244741 C22orf23Q9BZE7 217 aa20.9■□□□□ 0.94
CDKN1A-201ENST00000244741 PSDA5PKW4 1024 aaPredicted RBP20.9■□□□□ 0.94
CDKN1A-201ENST00000244741 FOXO4P98177 505 aa20.9■□□□□ 0.94
CDKN1A-201ENST00000244741 DDR1Q08345 913 aa20.9■□□□□ 0.94
CDKN1A-201ENST00000244741 LMBR1LQ6UX01 489 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms