RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SELENOSQ9BQE4 189 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 CCDC129Q6ZRS4 1044 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 NMIQ13287 307 aaPredicted RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 IFIT3O14879 490 aaKnown RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 HFM1A2PYH4 1435 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 SLU7O95391 586 aaKnown RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 ZRSR2Q15696 482 aaKnown RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 F13A1P00488 732 aa8.67□□□□□ -1.02
RIF1-201ENST00000243326 ZNF397Q8NF99 534 aaPredicted RBP8.67□□□□□ -1.02
RIF1-201ENST00000243326 PPP1R42Q7Z4L9 355 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 ZSCAN29Q8IWY8 852 aaPredicted RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 KIF1BPQ96EK5 621 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 MPHOSPH8Q99549 860 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 ORC3Q9UBD5 711 aaPredicted RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 BAZ2BQ9UIF8 2168 aaKnown RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 GSTTP1A0A1W2PQM5 241 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 TTC19Q6DKK2 380 aaPredicted RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 HPDP32754 393 aaPredicted RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 CCT6AP40227 531 aaKnown RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 TXLNBQ8N3L3 684 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 DDX19AQ9NUU7 478 aaKnown RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 TSPYL6Q8N831 410 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
RIF1-201ENST00000243326 IDEP14735 1019 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 NDUFB9Q9Y6M9 179 aa8.66□□□□□ -1.02
RIF1-201ENST00000243326 CEP126Q9P2H0 1117 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 RRAGBQ5VZM2 374 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 IQCEQ6IPM2 695 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 CCDC160A6NGH7 325 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 FLIIQ13045 1269 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 ZNF569Q5MCW4 686 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 TLDC2A0PJX2 215 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 PSMB7Q99436 277 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 NESP48681 1621 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 PLEKHH1Q9ULM0 1364 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 RAPGEF3O95398 923 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 NEK11Q8NG66 645 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 RAB3GAP1Q15042 981 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
RIF1-201ENST00000243326 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 Q6ZUG5 572 aa8.65□□□□□ -1.02
RIF1-201ENST00000243326 GNAT3A8MTJ3 354 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.03
RIF1-201ENST00000243326 NAA25Q14CX7 972 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 PTPROQ16827 1216 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 JAG2Q9Y219 1238 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 MAPKBP1O60336 1514 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 KLF18A0A0U1RQI7 1052 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 COBLO75128 1261 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.03
RIF1-201ENST00000243326 ADGRF5Q8IZF2 1346 aa8.65□□□□□ -1.03
RIF1-201ENST00000243326 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.03
RIF1-201ENST00000243326 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 GOLGA8FQ08AF8 430 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 GOLGA8DPQ0D2H9 430 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 ESYT1Q9BSJ8 1104 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 ARFGAP3Q9NP61 516 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
RIF1-201ENST00000243326 PDE6BP35913 854 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 EHBP1L1Q8N3D4 1523 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 NF2P35240 595 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 SCAND2PQ9GZW5 306 aaPredicted RBP8.64□□□□□ -1.03
RIF1-201ENST00000243326 HSF2BPO75031 334 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 EVCP57679 992 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 CNTRLQ7Z7A1 2325 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 N4BP3O15049 544 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 MAPK8IP1Q9UQF2 711 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 SYKP43405 635 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 CDKL5O76039 1030 aa8.64□□□□□ -1.03
RIF1-201ENST00000243326 MAP9Q49MG5 647 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 NLRP5P59047 1200 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 NAPBQ9H115 298 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 PDE1AP54750 535 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 KRT32Q14532 448 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 YEATS4O95619 227 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CCDC25Q86WR0 208 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 DHX58Q96C10 678 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CHPF2Q9P2E5 772 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 ATF3P18847 181 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 AK2P54819 239 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CCDC40Q4G0X9 1142 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 TRIM47Q96LD4 638 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 SCAPERQ9BY12 1400 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 FOXO3O43524 673 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 PKP1Q13835 747 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CARD6Q9BX69 1037 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 PLS1Q14651 629 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 AKNAD1Q5T1N1 836 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms