RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 KCNG4Q8TDN1 519 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 EID1Q9Y6B2 187 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 TERF2Q15554 542 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 ELP1O95163 1332 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 ZSCAN20P17040 1043 aaPredicted RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 FAM173BQ6P4H8 233 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 IMPACTQ9P2X3 320 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11□□□□□ -0.654e-7■■□□□ 12.3
NUDCD1-201ENST00000239690 CCDC175P0C221 793 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 NEK11Q8NG66 645 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 KDM5DQ9BY66 1539 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 RAD50Q92878 1312 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 CCDC102BQ68D86 513 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
NUDCD1-201ENST00000239690 WDR62O43379 1518 aa11□□□□□ -0.65
NUDCD1-201ENST00000239690 KIF21AQ7Z4S6 1674 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 CPA1P15085 419 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 SYKP43405 635 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 NME9Q86XW9 330 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 RAPGEF6Q8TEU7 1601 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 GNAT3A8MTJ3 354 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 ERLIN2O94905 339 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 NF2P35240 595 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 DRC1Q96MC2 740 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 PLCD4Q9BRC7 762 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 DDX41Q9UJV9 622 aaKnown RBP10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 BCORL1Q5H9F3 1711 aa10.99□□□□□ -0.65
NUDCD1-201ENST00000239690 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 NCBP1Q09161 790 aaKnown RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 LEO1Q8WVC0 666 aaPredicted RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 CTAGE9A4FU28 777 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 CLSTN1O94985 981 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 FAM160A1Q05DH4 1040 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 CUL4AQ13619 759 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 NUP88Q99567 741 aaPredicted RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 MBD5Q9P267 1494 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 YEATS4O95619 227 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 HSPA4P34932 840 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 PAFAH1B1P43034 410 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 WASF1Q92558 559 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 MPHOSPH8Q99549 860 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 LRRC8AQ8IWT6 810 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 PUF60Q9UHX1 559 aaKnown RBP10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 CEP131Q9UPN4 1083 aa10.98□□□□□ -0.65
NUDCD1-201ENST00000239690 DNAJC21Q5F1R6 531 aaKnown RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 CREB3L3Q68CJ9 461 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 MRFAP1L1Q96HT8 127 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 SPTLC3Q9NUV7 552 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 MSH6P52701 1360 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 SGSM2O43147 1006 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 KARSQ15046 597 aaKnown RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 SPA17Q15506 151 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 ABCC4O15439 1325 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 TDO2P48775 406 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 CKAP4Q07065 602 aaKnown RBP10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 ATL3Q6DD88 541 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 GBP6Q6ZN66 633 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 TTC41PQ6P2S7 1318 aa10.97□□□□□ -0.65
NUDCD1-201ENST00000239690 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 RHOXF2BP0C7M4 288 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 MYCBPQ99417 103 aaPredicted RBP10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 RHOXF2Q9BQY4 288 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 MAGI3Q5TCQ9 1506 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 RGS12O14924 1447 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 PPFIA3O75145 1194 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 FBLN1P23142 703 aa10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
NUDCD1-201ENST00000239690 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms