RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 CHMP4CQ96CF2 233 aa7.52□□□□□ -1.2
SGIP1-201ENST00000237247 BSDC1Q9NW68 430 aaPredicted RBP7.52□□□□□ -1.2
SGIP1-201ENST00000237247 SH3BP1Q9Y3L3 701 aa7.52□□□□□ -1.2
SGIP1-201ENST00000237247 TPM3P06753 285 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 GNAI3P08754 354 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 KIAA2012Q0VF49 1180 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 EIF4A2Q14240 407 aaKnown RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 NUDT16Q96DE0 195 aaKnown RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 MORC2Q9Y6X9 1032 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 COL5A2P05997 1499 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 GNAI2P04899 355 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 NUTM2DQ5VT03 806 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-201ENST00000237247 MEIS3Q99687 375 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 DOCK2Q92608 1830 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 CHMLP26374 656 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 PIBF1Q8WXW3 757 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 BCL2L12Q9HB09 334 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
SGIP1-201ENST00000237247 SPEF2Q9C093 1822 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 LRRC37AA6NMS7 1700 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 HSPA4P34932 840 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 ATP8B2P98198 1209 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 CCDC183Q5T5S1 534 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 ICE2Q659A1 982 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.51□□□□□ -1.21
SGIP1-201ENST00000237247 TTC36A6NLP5 189 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-201ENST00000237247 LRRCC1Q9C099 1032 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 ACEP12821 1306 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 SOS2Q07890 1332 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-201ENST00000237247 CCDC171Q6TFL3 1326 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 SYCE3A1L190 88 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 IRF6O14896 467 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 MX1P20591 662 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 KCNB2Q92953 911 aa7.51□□□□□ -1.21
SGIP1-201ENST00000237247 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
SGIP1-201ENST00000237247 FLT4P35916 1363 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 DHX16O60231 1041 aaKnown RBP7.5□□□□□ -1.21
SGIP1-201ENST00000237247 NBPF10Q6P3W6 841 aaKnown RBP7.5□□□□□ -1.21
SGIP1-201ENST00000237247 RBM27Q9P2N5 1060 aaKnown RBP7.5□□□□□ -1.21
SGIP1-201ENST00000237247 USP25Q9UHP3 1055 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 MYH3P11055 1940 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 MEGF6O75095 1541 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
SGIP1-201ENST00000237247 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 FUCA2Q9BTY2 467 aa7.5□□□□□ -1.21
SGIP1-201ENST00000237247 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 NEK4P51957 841 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 GTF2A1P52655 376 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 TTC14Q96N46 770 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 MED4Q9NPJ6 270 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 HDGFP51858 240 aaKnown RBP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 POLA2Q14181 598 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 CTNNA3Q9UI47 895 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 NSFL1CQ9UNZ2 370 aaKnown RBP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 SPDYE4A6NLX3 237 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 U2AF2P26368 475 aaKnown RBP eCLIP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 UBE2HP62256 183 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 MUM1L1Q5H9M0 696 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 SSH3Q8TE77 659 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 RBM28Q9NW13 759 aaKnown RBP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
SGIP1-201ENST00000237247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.49□□□□□ -1.21
SGIP1-201ENST00000237247 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
SGIP1-201ENST00000237247 ZRANB1Q9UGI0 708 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 BCL9O00512 1426 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 TM6SF1Q9BZW5 370 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
SGIP1-201ENST00000237247 HOXB7P09629 217 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 SULT6B1Q6IMI4 303 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 TXNDC2Q86VQ3 553 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 MNS1Q8NEH6 495 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 SNRKQ9NRH2 765 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 NUP98P52948 1817 aa7.48□□□□□ -1.21
SGIP1-201ENST00000237247 TRHP20396 242 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 COL4A1P02462 1669 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 SLC4A2P04920 1241 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ZSCAN22P10073 491 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 GSCP56915 257 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ZKSCAN8Q15776 578 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 CCDC30Q5VVM6 783 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ALDH8A1Q9H2A2 487 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 PALD1Q9ULE6 856 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-201ENST00000237247 MYH15Q9Y2K3 1946 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 DLEC1Q9Y238 1755 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 TTC41PQ6P2S7 1318 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 JCADQ9P266 1359 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 UBR3Q6ZT12 1888 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms