RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SYT1P21579 422 aa18.66■□□□□ 0.58
CTSD-201ENST00000236671 TEFQ10587 303 aa18.66■□□□□ 0.58
CTSD-201ENST00000236671 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
CTSD-201ENST00000236671 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
CTSD-201ENST00000236671 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
CTSD-201ENST00000236671 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
CTSD-201ENST00000236671 STX6O43752 255 aa18.65■□□□□ 0.58
CTSD-201ENST00000236671 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
CTSD-201ENST00000236671 ZNF530Q6P9A1 599 aaPredicted RBP18.65■□□□□ 0.58
CTSD-201ENST00000236671 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
CTSD-201ENST00000236671 LARGE1O95461 756 aa18.65■□□□□ 0.58
CTSD-201ENST00000236671 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
CTSD-201ENST00000236671 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
CTSD-201ENST00000236671 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
CTSD-201ENST00000236671 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
CTSD-201ENST00000236671 DBF4Q9UBU7 674 aaPredicted RBP18.65■□□□□ 0.58
CTSD-201ENST00000236671 ATRNO75882 1429 aa18.64■□□□□ 0.58
CTSD-201ENST00000236671 CPA1P15085 419 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 PTH1RQ03431 593 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 F13A1P00488 732 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 KCNB2Q92953 911 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 SMC3Q9UQE7 1217 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.57
CTSD-201ENST00000236671 ABCC6O95255 1503 aa18.64■□□□□ 0.57
CTSD-201ENST00000236671 NCAPD2Q15021 1401 aa18.63■□□□□ 0.57
CTSD-201ENST00000236671 VPS72Q15906 364 aa18.63■□□□□ 0.57
CTSD-201ENST00000236671 GJD4Q96KN9 370 aaPredicted RBP18.63■□□□□ 0.57
CTSD-201ENST00000236671 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
CTSD-201ENST00000236671 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
CTSD-201ENST00000236671 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 UBE2HP62256 183 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 UVSSAQ2YD98 709 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 ZSWIM6Q9HCJ5 1215 aa18.62■□□□□ 0.57
CTSD-201ENST00000236671 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
CTSD-201ENST00000236671 A0A0G2JS52 829 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 RNMTO43148 476 aaKnown RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 C9orf78Q9NZ63 289 aaPredicted RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 GIGYF1O75420 1035 aaPredicted RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
CTSD-201ENST00000236671 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 MEGF6O75095 1541 aa18.61■□□□□ 0.57
CTSD-201ENST00000236671 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 EVI5LQ96CN4 794 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 MTMR6Q9Y217 621 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 ATP6V1DQ9Y5K8 247 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 WNK3Q9BYP7 1800 aa18.6■□□□□ 0.57
CTSD-201ENST00000236671 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 FIBPO43427 364 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 GJB2P29033 226 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 NECTIN1Q15223 517 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 CWF19L2Q2TBE0 894 aaKnown RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 AMOTQ4VCS5 1084 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 LETM1O95202 739 aaPredicted RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 PTMAP06454 111 aaKnown RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
CTSD-201ENST00000236671 CYP46A1Q9Y6A2 500 aa18.59■□□□□ 0.57
CTSD-201ENST00000236671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.573e-10■□□□□ 9.8
CTSD-201ENST00000236671 GLIPR1L2Q4G1C9 344 aa18.58■□□□□ 0.57
CTSD-201ENST00000236671 AACSQ86V21 672 aa18.58■□□□□ 0.57
CTSD-201ENST00000236671 CARD10Q9BWT7 1032 aa18.58■□□□□ 0.57
CTSD-201ENST00000236671 KAZALD1Q96I82 304 aa18.58■□□□□ 0.56
CTSD-201ENST00000236671 UTYO14607 1347 aa18.57■□□□□ 0.56
CTSD-201ENST00000236671 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
CTSD-201ENST00000236671 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
CTSD-201ENST00000236671 C1orf141Q5JVX7 400 aa18.57■□□□□ 0.56
CTSD-201ENST00000236671 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
CTSD-201ENST00000236671 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
CTSD-201ENST00000236671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
CTSD-201ENST00000236671 SASH1O94885 1247 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
CTSD-201ENST00000236671 ME3Q16798 604 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 PDCL3Q9H2J4 239 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms