RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
VEGFA-201ENST00000230480 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
VEGFA-201ENST00000230480 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
VEGFA-201ENST00000230480 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
VEGFA-201ENST00000230480 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
VEGFA-201ENST00000230480 GRIN3BO60391 1043 aa17.71■□□□□ 0.43
VEGFA-201ENST00000230480 PDE6BP35913 854 aa17.71■□□□□ 0.43
VEGFA-201ENST00000230480 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
VEGFA-201ENST00000230480 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
VEGFA-201ENST00000230480 H0YIN7 160 aa17.7■□□□□ 0.42
VEGFA-201ENST00000230480 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
VEGFA-201ENST00000230480 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
VEGFA-201ENST00000230480 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
VEGFA-201ENST00000230480 SNED1Q8TER0 1413 aa17.7■□□□□ 0.42
VEGFA-201ENST00000230480 CCDC88AQ3V6T2 1871 aa17.69■□□□□ 0.42
VEGFA-201ENST00000230480 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
VEGFA-201ENST00000230480 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
VEGFA-201ENST00000230480 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-201ENST00000230480 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
VEGFA-201ENST00000230480 E9PSI1 815 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 ST5P78524 1137 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 STYK1Q6J9G0 422 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 OLFM4Q6UX06 510 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 TTLL6Q8N841 843 aa17.68■□□□□ 0.42
VEGFA-201ENST00000230480 HOXA10P31260 410 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-201ENST00000230480 FLIIQ13045 1269 aa17.67■□□□□ 0.42
VEGFA-201ENST00000230480 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.422e-16■□□□□ 8.9
VEGFA-201ENST00000230480 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
VEGFA-201ENST00000230480 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
VEGFA-201ENST00000230480 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
VEGFA-201ENST00000230480 NFKBIEO00221 500 aa17.66■□□□□ 0.42
VEGFA-201ENST00000230480 HCLS1P14317 486 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-201ENST00000230480 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
VEGFA-201ENST00000230480 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
VEGFA-201ENST00000230480 MRPL50Q8N5N7 158 aaKnown RBP17.66■□□□□ 0.42
VEGFA-201ENST00000230480 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-201ENST00000230480 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
VEGFA-201ENST00000230480 MYD88Q99836 296 aa17.66■□□□□ 0.42
VEGFA-201ENST00000230480 NPR1P16066 1061 aa17.65■□□□□ 0.42
VEGFA-201ENST00000230480 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
VEGFA-201ENST00000230480 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
VEGFA-201ENST00000230480 ARHGAP27Q6ZUM4 889 aa17.64■□□□□ 0.41
VEGFA-201ENST00000230480 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
VEGFA-201ENST00000230480 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
VEGFA-201ENST00000230480 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
VEGFA-201ENST00000230480 F6X3S4 739 aa17.63■□□□□ 0.41
VEGFA-201ENST00000230480 C21orf2O43822 256 aa17.63■□□□□ 0.41
VEGFA-201ENST00000230480 RASSF7Q02833 373 aa17.63■□□□□ 0.41
VEGFA-201ENST00000230480 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
VEGFA-201ENST00000230480 RNF123Q5XPI4 1314 aa17.63■□□□□ 0.41
VEGFA-201ENST00000230480 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
VEGFA-201ENST00000230480 CASP7P55210 303 aa17.62■□□□□ 0.41
VEGFA-201ENST00000230480 RTL5Q5HYW3 569 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-201ENST00000230480 ZNF784Q8NCA9 323 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-201ENST00000230480 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
VEGFA-201ENST00000230480 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
VEGFA-201ENST00000230480 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-201ENST00000230480 NEURL1BA8MQ27 555 aa17.61■□□□□ 0.41
VEGFA-201ENST00000230480 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
VEGFA-201ENST00000230480 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
VEGFA-201ENST00000230480 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
VEGFA-201ENST00000230480 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
VEGFA-201ENST00000230480 H7C1W4 665 aa17.6■□□□□ 0.41
VEGFA-201ENST00000230480 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-201ENST00000230480 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
VEGFA-201ENST00000230480 BEND3Q5T5X7 828 aa17.6■□□□□ 0.41
VEGFA-201ENST00000230480 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-201ENST00000230480 DNAAF4Q8WXU2 420 aa17.6■□□□□ 0.41
VEGFA-201ENST00000230480 NPHP1O15259 732 aa17.59■□□□□ 0.41
VEGFA-201ENST00000230480 DDX58O95786 925 aaKnown RBP17.59■□□□□ 0.41
VEGFA-201ENST00000230480 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.418e-7■□□□□ 10.9
VEGFA-201ENST00000230480 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
VEGFA-201ENST00000230480 ABCC4O15439 1325 aa17.58■□□□□ 0.4
VEGFA-201ENST00000230480 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-201ENST00000230480 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-201ENST00000230480 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.4
VEGFA-201ENST00000230480 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-201ENST00000230480 COL4A5P29400 1685 aa17.58■□□□□ 0.4
VEGFA-201ENST00000230480 GCKRQ14397 625 aa17.57■□□□□ 0.4
VEGFA-201ENST00000230480 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
VEGFA-201ENST00000230480 MYH3P11055 1940 aa17.57■□□□□ 0.4
VEGFA-201ENST00000230480 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
VEGFA-201ENST00000230480 LTBP3Q9NS15 1303 aa17.56■□□□□ 0.4
VEGFA-201ENST00000230480 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
VEGFA-201ENST00000230480 CELF1Q92879 486 aaKnown RBP17.56■□□□□ 0.4
VEGFA-201ENST00000230480 ALDH1B1P30837 517 aa17.55■□□□□ 0.4
VEGFA-201ENST00000230480 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
VEGFA-201ENST00000230480 BRPF1P55201 1214 aaPredicted RBP17.55■□□□□ 0.4
VEGFA-201ENST00000230480 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
VEGFA-201ENST00000230480 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
VEGFA-201ENST00000230480 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
VEGFA-201ENST00000230480 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
VEGFA-201ENST00000230480 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
VEGFA-201ENST00000230480 LTBP1Q14766 1721 aa17.54■□□□□ 0.4
VEGFA-201ENST00000230480 DUOX1Q9NRD9 1551 aa17.53■□□□□ 0.4
VEGFA-201ENST00000230480 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
VEGFA-201ENST00000230480 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
VEGFA-201ENST00000230480 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms