RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
LTBR-201ENST00000228918 RBM8AQ9Y5S9 174 aaKnown RBP19.5■□□□□ 0.71
LTBR-201ENST00000228918 NMIQ13287 307 aaPredicted RBP19.5■□□□□ 0.71
LTBR-201ENST00000228918 FAM227BQ96M60 508 aa19.5■□□□□ 0.71
LTBR-201ENST00000228918 MTMR6Q9Y217 621 aa19.5■□□□□ 0.71
LTBR-201ENST00000228918 IGKV5-2P06315 115 aa19.49■□□□□ 0.71
LTBR-201ENST00000228918 ZKSCAN1P17029 563 aaPredicted RBP19.49■□□□□ 0.71
LTBR-201ENST00000228918 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
LTBR-201ENST00000228918 CREB3L3Q68CJ9 461 aa19.49■□□□□ 0.71
LTBR-201ENST00000228918 LMOD2Q6P5Q4 547 aa19.49■□□□□ 0.71
LTBR-201ENST00000228918 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
LTBR-201ENST00000228918 TERF1P54274 439 aa19.49■□□□□ 0.71
LTBR-201ENST00000228918 CCDC8Q9H0W5 538 aaPredicted RBP19.49■□□□□ 0.71
LTBR-201ENST00000228918 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
LTBR-201ENST00000228918 ERBB3P21860 1342 aa19.48■□□□□ 0.71
LTBR-201ENST00000228918 KIF1AQ12756 1690 aa19.48■□□□□ 0.71
LTBR-201ENST00000228918 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
LTBR-201ENST00000228918 FIBPO43427 364 aa19.48■□□□□ 0.71
LTBR-201ENST00000228918 UVSSAQ2YD98 709 aa19.48■□□□□ 0.71
LTBR-201ENST00000228918 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
LTBR-201ENST00000228918 LETM1O95202 739 aaPredicted RBP19.48■□□□□ 0.71
LTBR-201ENST00000228918 ME3Q16798 604 aa19.48■□□□□ 0.71
LTBR-201ENST00000228918 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
LTBR-201ENST00000228918 RIC3Q7Z5B4 369 aa19.47■□□□□ 0.71
LTBR-201ENST00000228918 PDCL3Q9H2J4 239 aa19.47■□□□□ 0.71
LTBR-201ENST00000228918 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
LTBR-201ENST00000228918 MST1RQ04912 1400 aa19.47■□□□□ 0.71
LTBR-201ENST00000228918 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 A0A0D9SFI3 127 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 SLC27A2O14975 620 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 CSPP1Q1MSJ5 1256 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 SIL1Q9H173 461 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 JCADQ9P266 1359 aa19.46■□□□□ 0.71
LTBR-201ENST00000228918 KCNJ4P48050 445 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 SLC39A6Q13433 755 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 DDX54Q8TDD1 881 aaKnown RBP19.45■□□□□ 0.7
LTBR-201ENST00000228918 DNM1Q05193 864 aaKnown RBP19.45■□□□□ 0.7
LTBR-201ENST00000228918 FSD1Q9BTV5 496 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 BOLA2Q9H3K6 86 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
LTBR-201ENST00000228918 PSMA5P28066 241 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 NEXNQ0ZGT2 675 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 GCKRQ14397 625 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 DTNBO60941 627 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 PTMAP06454 111 aaKnown RBP19.44■□□□□ 0.7
LTBR-201ENST00000228918 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 KLHDC4Q8TBB5 520 aa19.44■□□□□ 0.7
LTBR-201ENST00000228918 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
LTBR-201ENST00000228918 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
LTBR-201ENST00000228918 VPS37CA5D8V6 355 aaPredicted RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 MYL6BP14649 208 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 COL9A3Q14050 684 aaPredicted RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 RAPGEF4Q8WZA2 1011 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 METTL22Q9BUU2 404 aaPredicted RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 R3HCC1Q9Y3T6 440 aaKnown RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 AFDNP55196 1824 aaKnown RBP19.42■□□□□ 0.7
LTBR-201ENST00000228918 TPRNQ4KMQ1 711 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 RNF20Q5VTR2 975 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 MYD88Q99836 296 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 FUCA2Q9BTY2 467 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 USP25Q9UHP3 1055 aa19.42■□□□□ 0.7
LTBR-201ENST00000228918 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.41■□□□□ 0.7
LTBR-201ENST00000228918 ABCC6O95255 1503 aa19.41■□□□□ 0.7
LTBR-201ENST00000228918 PHKG2P15735 406 aa19.41■□□□□ 0.7
LTBR-201ENST00000228918 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
LTBR-201ENST00000228918 COPS6Q7L5N1 327 aa19.41■□□□□ 0.7
LTBR-201ENST00000228918 ALDH8A1Q9H2A2 487 aaPredicted RBP19.41■□□□□ 0.7
LTBR-201ENST00000228918 MEGF6O75095 1541 aa19.41■□□□□ 0.7
LTBR-201ENST00000228918 PDIA4P13667 645 aaKnown RBP19.4■□□□□ 0.7
LTBR-201ENST00000228918 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
LTBR-201ENST00000228918 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 ZNF589Q86UQ0 364 aaPredicted RBP19.4■□□□□ 0.7
LTBR-201ENST00000228918 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 ADAMTSL3P82987 1691 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 RPS6KB1P23443 525 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 HMG20BQ9P0W2 317 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 TAF6LQ9Y6J9 622 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 ARFGEF2Q9Y6D5 1785 aa19.4■□□□□ 0.7
LTBR-201ENST00000228918 LARP1BQ659C4 914 aaKnown RBP19.39■□□□□ 0.69
LTBR-201ENST00000228918 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
LTBR-201ENST00000228918 COL18A1P39060 1754 aa19.39■□□□□ 0.69
LTBR-201ENST00000228918 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.69
LTBR-201ENST00000228918 RFX5P48382 616 aaPredicted RBP19.39■□□□□ 0.69
LTBR-201ENST00000228918 TSGA10IPQ3SY00 556 aa19.39■□□□□ 0.69
LTBR-201ENST00000228918 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
LTBR-201ENST00000228918 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
LTBR-201ENST00000228918 TOB2Q14106 344 aaPredicted RBP19.38■□□□□ 0.69
LTBR-201ENST00000228918 GIMAP6Q6P9H5 292 aa19.38■□□□□ 0.69
LTBR-201ENST00000228918 TCEANC2Q96MN5 208 aa19.38■□□□□ 0.69
LTBR-201ENST00000228918 NLRP2Q9NX02 1062 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms