RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 BCL11BQ9C0K0 894 aaPredicted RBP29.73■■■□□ 2.35
GSK3A-201ENST00000222330 GSPT1P15170 499 aaKnown RBP29.73■■■□□ 2.35
GSK3A-201ENST00000222330 TRIM28Q13263 835 aaKnown RBP29.73■■■□□ 2.35
GSK3A-201ENST00000222330 FOXO4P98177 505 aa29.72■■■□□ 2.35
GSK3A-201ENST00000222330 TSHZ3Q63HK5 1081 aa29.72■■■□□ 2.35
GSK3A-201ENST00000222330 RABL6Q3YEC7 729 aaPredicted RBP29.71■■■□□ 2.35
GSK3A-201ENST00000222330 LMBR1LQ6UX01 489 aa29.71■■■□□ 2.35
GSK3A-201ENST00000222330 FAM89AQ96GI7 184 aa29.71■■■□□ 2.35
GSK3A-201ENST00000222330 SIL1Q9H173 461 aa29.71■■■□□ 2.35
GSK3A-201ENST00000222330 CICQ96RK0 1608 aaPredicted RBP29.71■■■□□ 2.35
GSK3A-201ENST00000222330 NUP98P52948 1817 aa29.71■■■□□ 2.35
GSK3A-201ENST00000222330 COL5A3P25940 1745 aaPredicted RBP29.71■■■□□ 2.35
GSK3A-201ENST00000222330 SMIM5Q71RC9 77 aa29.71■■■□□ 2.35
GSK3A-201ENST00000222330 ERVV-1B6SEH8 477 aa29.7■■■□□ 2.35
GSK3A-201ENST00000222330 KIF1BPQ96EK5 621 aa29.7■■■□□ 2.35
GSK3A-201ENST00000222330 HSP90AB4PQ58FF6 505 aa29.7■■■□□ 2.34
GSK3A-201ENST00000222330 TTC22Q5TAA0 569 aa29.7■■■□□ 2.34
GSK3A-201ENST00000222330 NLRP10Q86W26 655 aa29.7■■■□□ 2.34
GSK3A-201ENST00000222330 SYNE4Q8N205 404 aa29.7■■■□□ 2.34
GSK3A-201ENST00000222330 COL15A1P39059 1388 aa29.7■■■□□ 2.34
GSK3A-201ENST00000222330 PDE1AP54750 535 aa29.69■■■□□ 2.34
GSK3A-201ENST00000222330 NUTM1Q86Y26 1132 aa29.69■■■□□ 2.34
GSK3A-201ENST00000222330 CCNL1Q9UK58 526 aaPredicted RBP29.69■■■□□ 2.34
GSK3A-201ENST00000222330 CHMP3Q9Y3E7 222 aa29.69■■■□□ 2.34
GSK3A-201ENST00000222330 RREB1Q92766 1687 aa29.69■■■□□ 2.34
GSK3A-201ENST00000222330 HSP90AB3PQ58FF7 597 aa29.69■■■□□ 2.34
GSK3A-201ENST00000222330 SALL3Q9BXA9 1300 aa29.68■■■□□ 2.34
GSK3A-201ENST00000222330 RFX5P48382 616 aaPredicted RBP29.67■■■□□ 2.34
GSK3A-201ENST00000222330 ZNF831Q5JPB2 1677 aa29.67■■■□□ 2.34
GSK3A-201ENST00000222330 G3BP1Q13283 466 aaKnown RBP eCLIP29.66■■■□□ 2.34
GSK3A-201ENST00000222330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.66■■■□□ 2.34
GSK3A-201ENST00000222330 CAMTA2O94983 1202 aa29.66■■■□□ 2.34
GSK3A-201ENST00000222330 MX1P20591 662 aa29.66■■■□□ 2.34
GSK3A-201ENST00000222330 ZBTB38Q8NAP3 1195 aaPredicted RBP29.66■■■□□ 2.34
GSK3A-201ENST00000222330 PCCAP05165 728 aaPredicted RBP29.65■■■□□ 2.34
GSK3A-201ENST00000222330 PTPN12Q05209 780 aaKnown RBP29.65■■■□□ 2.34
GSK3A-201ENST00000222330 UBN2Q6ZU65 1347 aa29.65■■■□□ 2.34
GSK3A-201ENST00000222330 SASH1O94885 1247 aa29.64■■■□□ 2.34
GSK3A-201ENST00000222330 ZNF34Q8IZ26 560 aa29.64■■■□□ 2.34
GSK3A-201ENST00000222330 OSBPL3Q9H4L5 887 aa29.64■■■□□ 2.34
GSK3A-201ENST00000222330 ANKRD36CQ5JPF3 1778 aa29.64■■■□□ 2.33
GSK3A-201ENST00000222330 COPRSQ9NQ92 184 aa29.63■■■□□ 2.33
GSK3A-201ENST00000222330 CNTNAP4Q9C0A0 1308 aa29.63■■■□□ 2.33
GSK3A-201ENST00000222330 TRMT112Q9UI30 125 aaKnown RBP29.62■■■□□ 2.33
GSK3A-201ENST00000222330 ERC1Q8IUD2 1116 aa29.62■■■□□ 2.33
GSK3A-201ENST00000222330 CCDC85AQ96PX6 553 aaPredicted RBP29.62■■■□□ 2.33
GSK3A-201ENST00000222330 LY75O60449 1722 aa29.61■■■□□ 2.33
GSK3A-201ENST00000222330 FAM177BA6PVY3 158 aa29.61■■■□□ 2.33
GSK3A-201ENST00000222330 SDSP20132 328 aa29.61■■■□□ 2.33
GSK3A-201ENST00000222330 ANP32AP39687 249 aaKnown RBP29.61■■■□□ 2.33
GSK3A-201ENST00000222330 STAP2Q9UGK3 403 aa29.6■■■□□ 2.33
GSK3A-201ENST00000222330 APBA3O96018 575 aa29.59■■■□□ 2.33
GSK3A-201ENST00000222330 CLASRPQ8N2M8 674 aaKnown RBP29.59■■■□□ 2.33
GSK3A-201ENST00000222330 LRRC4BQ9NT99 713 aa29.59■■■□□ 2.33
GSK3A-201ENST00000222330 GNPATO15228 680 aa29.59■■■□□ 2.33
GSK3A-201ENST00000222330 TBC1D9Q6ZT07 1266 aa29.59■■■□□ 2.33
GSK3A-201ENST00000222330 RC3H1Q5TC82 1133 aaKnown RBP29.58■■■□□ 2.33
GSK3A-201ENST00000222330 SUSD4Q5VX71 490 aa29.58■■■□□ 2.33
GSK3A-201ENST00000222330 AMIGO3Q86WK7 504 aa29.58■■■□□ 2.33
GSK3A-201ENST00000222330 ZNF594Q96JF6 807 aaPredicted RBP29.58■■■□□ 2.33
GSK3A-201ENST00000222330 MFAP1P55081 439 aaKnown RBP29.57■■■□□ 2.32
GSK3A-201ENST00000222330 NIP7Q9Y221 180 aaKnown RBP eCLIP29.56■■■□□ 2.32
GSK3A-201ENST00000222330 IRS4O14654 1257 aaPredicted RBP29.56■■■□□ 2.32
GSK3A-201ENST00000222330 RPS6KA4O75676 772 aa29.56■■■□□ 2.32
GSK3A-201ENST00000222330 AACSQ86V21 672 aa29.56■■■□□ 2.32
GSK3A-201ENST00000222330 PROM2Q8N271 834 aa29.55■■■□□ 2.32
GSK3A-201ENST00000222330 EAF2Q96CJ1 260 aaPredicted RBP29.55■■■□□ 2.32
GSK3A-201ENST00000222330 PLA2G12BQ9BX93 195 aa29.55■■■□□ 2.32
GSK3A-201ENST00000222330 CDHR2Q9BYE9 1310 aa29.55■■■□□ 2.32
GSK3A-201ENST00000222330 TNS1Q9HBL0 1735 aaKnown RBP29.55■■■□□ 2.32
GSK3A-201ENST00000222330 CDC45O75419 566 aa29.54■■■□□ 2.32
GSK3A-201ENST00000222330 TAF1LQ8IZX4 1826 aa29.54■■■□□ 2.32
GSK3A-201ENST00000222330 CCDC8Q9H0W5 538 aaPredicted RBP29.54■■■□□ 2.32
GSK3A-201ENST00000222330 IFIT2P09913 472 aaKnown RBP29.53■■■□□ 2.32
GSK3A-201ENST00000222330 TFCP2Q12800 502 aa29.53■■■□□ 2.32
GSK3A-201ENST00000222330 CSF1RP07333 972 aa29.53■■■□□ 2.32
GSK3A-201ENST00000222330 SRP68Q9UHB9 627 aaKnown RBP29.53■■■□□ 2.32
GSK3A-201ENST00000222330 PI4K2BQ8TCG2 481 aa29.52■■■□□ 2.32
GSK3A-201ENST00000222330 RTCBQ9Y3I0 505 aaKnown RBP29.52■■■□□ 2.32
GSK3A-201ENST00000222330 CCDC57Q2TAC2 916 aa29.52■■■□□ 2.32
GSK3A-201ENST00000222330 IPO9Q96P70 1041 aaKnown RBP29.52■■■□□ 2.32
GSK3A-201ENST00000222330 MAP4K4O95819 1239 aaPredicted RBP29.51■■■□□ 2.31
GSK3A-201ENST00000222330 LRRC24Q50LG9 513 aa29.51■■■□□ 2.31
GSK3A-201ENST00000222330 USPL1Q5W0Q7 1092 aa29.51■■■□□ 2.31
GSK3A-201ENST00000222330 TTLL11Q8NHH1 800 aa29.51■■■□□ 2.31
GSK3A-201ENST00000222330 UTP14AQ9BVJ6 771 aaKnown RBP29.51■■■□□ 2.31
GSK3A-201ENST00000222330 UPF2Q9HAU5 1272 aaKnown RBP29.51■■■□□ 2.31
GSK3A-201ENST00000222330 TLR7Q9NYK1 1049 aaKnown RBP29.51■■■□□ 2.31
GSK3A-201ENST00000222330 ZNF652Q9Y2D9 606 aa29.51■■■□□ 2.31
GSK3A-201ENST00000222330 TRIM6-TRIM34B2RNG4 842 aa29.5■■■□□ 2.31
GSK3A-201ENST00000222330 HCLS1P14317 486 aaPredicted RBP29.5■■■□□ 2.31
GSK3A-201ENST00000222330 ATG9AQ7Z3C6 839 aa29.5■■■□□ 2.31
GSK3A-201ENST00000222330 PUS3Q9BZE2 481 aaKnown RBP29.5■■■□□ 2.31
GSK3A-201ENST00000222330 TXNRD1Q16881 649 aa29.5■■■□□ 2.31
GSK3A-201ENST00000222330 RILPL2Q969X0 211 aa29.5■■■□□ 2.31
GSK3A-201ENST00000222330 BCL2L12Q9HB09 334 aa29.5■■■□□ 2.31
GSK3A-201ENST00000222330 PHF14O94880 888 aa29.49■■■□□ 2.31
GSK3A-201ENST00000222330 PARP10Q53GL7 1025 aa29.49■■■□□ 2.31
GSK3A-201ENST00000222330 CLEC4GQ6UXB4 293 aa29.49■■■□□ 2.31
GSK3A-201ENST00000222330 BICDL1Q6ZP65 573 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms