RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 ZNF408Q9H9D4 720 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.46
TRPS1-201ENST00000220888 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 ERICH3Q5RHP9 1530 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 CYP7A1P22680 504 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 DNA2P51530 1060 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
TRPS1-201ENST00000220888 ANO10Q9NW15 660 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 SMARCA5O60264 1052 aaPredicted RBP12.15□□□□□ -0.46
TRPS1-201ENST00000220888 IFFO1Q0D2I5 559 aa12.15□□□□□ -0.46
TRPS1-201ENST00000220888 YEATS4O95619 227 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 IMPG2Q9BZV3 1241 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
TRPS1-201ENST00000220888 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
TRPS1-201ENST00000220888 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 NUP88Q99567 741 aaPredicted RBP12.14□□□□□ -0.47
TRPS1-201ENST00000220888 FLIIQ13045 1269 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 EVI5LQ96CN4 794 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 EHBP1L1Q8N3D4 1523 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 CRACR2AQ9BSW2 395 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 MICU3Q86XE3 530 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
TRPS1-201ENST00000220888 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
TRPS1-201ENST00000220888 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 TMCO5BA8MYB1 307 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 CCT2P78371 535 aaKnown RBP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 IDI1Q13907 227 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 NAA16Q6N069 864 aaPredicted RBP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 NESP48681 1621 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 KIF5CO60282 957 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 KRT13P13646 458 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 PLCG2P16885 1265 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 GNAQP50148 359 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 PPM1EQ8WY54 764 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 CAMK4Q16566 473 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 CCDC66A2RUB6 948 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 ZSCAN12O43309 604 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRPS1-201ENST00000220888 MMRN2Q9H8L6 949 aa12.13□□□□□ -0.47
TRPS1-201ENST00000220888 UBE4AQ14139 1066 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 MPNDQ8N594 471 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 IQSEC3Q9UPP2 1182 aaPredicted RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 TNRQ92752 1358 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 HAND2P61296 217 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 SMC1AQ14683 1233 aaKnown RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 APBB1IPQ7Z5R6 666 aaPredicted RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
TRPS1-201ENST00000220888 WTAPQ15007 396 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 KRT23Q9C075 422 aa12.12□□□□□ -0.47
TRPS1-201ENST00000220888 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 TBC1D5Q92609 795 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 ESR2Q92731 530 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
TRPS1-201ENST00000220888 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 ZMYND15Q9H091 742 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 ACEP12821 1306 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 IL2RBP14784 551 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
TRPS1-201ENST00000220888 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 SLC4A4Q9Y6R1 1079 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 PTPRCP08575 1304 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 IFIT1BQ5T764 474 aaKnown RBP12.11□□□□□ -0.47
TRPS1-201ENST00000220888 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
TRPS1-201ENST00000220888 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 LPXNO60711 386 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 EXOC1Q9NV70 894 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 PIK3R4Q99570 1358 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 KIF4BQ2VIQ3 1234 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 HECW1Q76N89 1606 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms