RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
USP11-201ENST00000218348 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
USP11-201ENST00000218348 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
USP11-201ENST00000218348 USP26Q9BXU7 913 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 ZHX1Q9UKY1 873 aaPredicted RBP12.17□□□□□ -0.46
USP11-201ENST00000218348 ADCY9O60503 1353 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 EXOC5O00471 708 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 RXRBP28702 533 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 IL25Q9H293 177 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 CHMP5Q9NZZ3 219 aa12.17□□□□□ -0.46
USP11-201ENST00000218348 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 UPF3BQ9BZI7 483 aaKnown RBP12.16□□□□□ -0.46
USP11-201ENST00000218348 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
USP11-201ENST00000218348 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
USP11-201ENST00000218348 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
USP11-201ENST00000218348 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 COL24A1Q17RW2 1714 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 PIGBQ92521 554 aa12.16□□□□□ -0.46
USP11-201ENST00000218348 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
USP11-201ENST00000218348 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 ERC2O15083 957 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
USP11-201ENST00000218348 SUCLG2Q96I99 432 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
USP11-201ENST00000218348 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
USP11-201ENST00000218348 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
USP11-201ENST00000218348 NEK4P51957 841 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 IBTKQ9P2D0 1353 aaPredicted RBP12.14□□□□□ -0.47
USP11-201ENST00000218348 KCNQ2O43526 872 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
USP11-201ENST00000218348 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 SSFA2P28290 1259 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 MCM4P33991 863 aa12.14□□□□□ -0.47
USP11-201ENST00000218348 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
USP11-201ENST00000218348 PKP1Q13835 747 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
USP11-201ENST00000218348 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
USP11-201ENST00000218348 REC8O95072 547 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 A1BGP04217 495 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 PDIA6Q15084 440 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 KRT27Q7Z3Y8 459 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
USP11-201ENST00000218348 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP11-201ENST00000218348 GRM8O00222 908 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
USP11-201ENST00000218348 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 LRP10Q7Z4F1 713 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 AACSQ86V21 672 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 HYPKQ9NX55 129 aa12.13□□□□□ -0.47
USP11-201ENST00000218348 CHMLP26374 656 aa12.12□□□□□ -0.47
USP11-201ENST00000218348 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
USP11-201ENST00000218348 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
USP11-201ENST00000218348 ARID3AQ99856 593 aa12.12□□□□□ -0.47
USP11-201ENST00000218348 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
USP11-201ENST00000218348 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
USP11-201ENST00000218348 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
USP11-201ENST00000218348 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
USP11-201ENST00000218348 ZNF830Q96NB3 372 aaPredicted RBP12.11□□□□□ -0.47
USP11-201ENST00000218348 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
USP11-201ENST00000218348 CPA1P15085 419 aa12.11□□□□□ -0.47
USP11-201ENST00000218348 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
USP11-201ENST00000218348 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
USP11-201ENST00000218348 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
USP11-201ENST00000218348 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
USP11-201ENST00000218348 HOXB7P09629 217 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
USP11-201ENST00000218348 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
USP11-201ENST00000218348 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
USP11-201ENST00000218348 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■□□ 15.2
USP11-201ENST00000218348 RABEP1Q15276 862 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 SNX21Q969T3 373 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
USP11-201ENST00000218348 TRAK2O60296 914 aa12.09□□□□□ -0.47
USP11-201ENST00000218348 POLA2Q14181 598 aa12.09□□□□□ -0.47
USP11-201ENST00000218348 A0A087WZG4 1122 aa12.09□□□□□ -0.47
USP11-201ENST00000218348 ASAP1Q9ULH1 1129 aa12.09□□□□□ -0.47
USP11-201ENST00000218348 SALL3Q9BXA9 1300 aa12.09□□□□□ -0.47
USP11-201ENST00000218348 ST18O60284 1047 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 PROM2Q8N271 834 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 ANKRD36CQ5JPF3 1778 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms