RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ME3Q16798 604 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 ANKRD24Q8TF21 1146 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
SRP54-201ENST00000216774 ALDH8A1Q9H2A2 487 aaPredicted RBP15.89■□□□□ 0.13
SRP54-201ENST00000216774 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
SRP54-201ENST00000216774 DNM1Q05193 864 aaKnown RBP15.89■□□□□ 0.13
SRP54-201ENST00000216774 ST3GAL1Q11201 340 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
SRP54-201ENST00000216774 ANKRD1Q15327 319 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 RNF20Q5VTR2 975 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 SASS6Q6UVJ0 657 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 FUCA2Q9BTY2 467 aa15.89■□□□□ 0.13
SRP54-201ENST00000216774 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SRP54-201ENST00000216774 PDCP20941 246 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 KCNJ4P48050 445 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 SLC27A2O14975 620 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 ADCY5O95622 1261 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 JCADQ9P266 1359 aa15.88■□□□□ 0.13
SRP54-201ENST00000216774 UQCRHLA0A096LP55 91 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 KDM4AO75164 1064 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 UQCRHP07919 91 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 PDIA6Q15084 440 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 MAP7D2Q96T17 732 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 TPCN1Q9ULQ1 816 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
SRP54-201ENST00000216774 DYNC1I1O14576 645 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
SRP54-201ENST00000216774 ELP1O95163 1332 aa15.87■□□□□ 0.13
SRP54-201ENST00000216774 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
SRP54-201ENST00000216774 HMG20BQ9P0W2 317 aa15.86■□□□□ 0.13
SRP54-201ENST00000216774 ZNF142P52746 1687 aaPredicted RBP15.86■□□□□ 0.13
SRP54-201ENST00000216774 NPHP4O75161 1426 aaPredicted RBP15.86■□□□□ 0.13
SRP54-201ENST00000216774 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 TSGA10IPQ3SY00 556 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 LARP1BQ659C4 914 aaKnown RBP15.85■□□□□ 0.13
SRP54-201ENST00000216774 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 CCDC8Q9H0W5 538 aaPredicted RBP15.85■□□□□ 0.13
SRP54-201ENST00000216774 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 KRT85P78386 507 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
SRP54-201ENST00000216774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.85■□□□□ 0.13
SRP54-201ENST00000216774 RPS6KB1P23443 525 aa15.84■□□□□ 0.13
SRP54-201ENST00000216774 GIMAP6Q6P9H5 292 aa15.84■□□□□ 0.13
SRP54-201ENST00000216774 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
SRP54-201ENST00000216774 RBM33Q96EV2 1170 aaKnown RBP15.84■□□□□ 0.13
SRP54-201ENST00000216774 TLR7Q9NYK1 1049 aaKnown RBP15.84■□□□□ 0.13
SRP54-201ENST00000216774 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
SRP54-201ENST00000216774 CCDC192P0DO97 292 aa15.83■□□□□ 0.13
SRP54-201ENST00000216774 AIMP1Q12904 312 aaKnown RBP15.83■□□□□ 0.13
SRP54-201ENST00000216774 GCKRQ14397 625 aa15.83■□□□□ 0.13
SRP54-201ENST00000216774 ZNF790Q6PG37 636 aa15.83■□□□□ 0.13
SRP54-201ENST00000216774 MTERF4Q7Z6M4 381 aaKnown RBP15.83■□□□□ 0.13
SRP54-201ENST00000216774 BOLA2Q9H3K6 86 aa15.83■□□□□ 0.13
SRP54-201ENST00000216774 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
SRP54-201ENST00000216774 RFX7Q2KHR2 1363 aa15.83■□□□□ 0.12
SRP54-201ENST00000216774 MST1RQ04912 1400 aa15.83■□□□□ 0.12
SRP54-201ENST00000216774 TPM3P06753 285 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 KRT32Q14532 448 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 METTL22Q9BUU2 404 aaPredicted RBP15.82■□□□□ 0.12
SRP54-201ENST00000216774 SCAND2PQ9GZW5 306 aaPredicted RBP15.82■□□□□ 0.12
SRP54-201ENST00000216774 SIL1Q9H173 461 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 AXIN2Q9Y2T1 843 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 CDC37L1Q7L3B6 337 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 DDX54Q8TDD1 881 aaKnown RBP15.82■□□□□ 0.12
SRP54-201ENST00000216774 ORAI2Q96SN7 254 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 SPTLC3Q9NUV7 552 aa15.82■□□□□ 0.12
SRP54-201ENST00000216774 C5P01031 1676 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 COL15A1P39059 1388 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 ERBB3P21860 1342 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 ATP5JP18859 108 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 TOB2Q14106 344 aaPredicted RBP15.81■□□□□ 0.12
SRP54-201ENST00000216774 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
SRP54-201ENST00000216774 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 TTC6Q86TZ1 520 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 PRIMPOLQ96LW4 560 aa15.81■□□□□ 0.12
SRP54-201ENST00000216774 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 TAF5LO75529 589 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 ZNF589Q86UQ0 364 aaPredicted RBP15.8■□□□□ 0.12
SRP54-201ENST00000216774 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 NUP62CLQ9H1M0 184 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 FAM13BQ9NYF5 915 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 KDM6AO15550 1401 aaPredicted RBP15.8■□□□□ 0.12
SRP54-201ENST00000216774 ABCC6O95255 1503 aa15.8■□□□□ 0.12
SRP54-201ENST00000216774 HMGN5P82970 282 aaKnown RBP15.79■□□□□ 0.12
SRP54-201ENST00000216774 RBM10P98175 930 aaKnown RBP15.79■□□□□ 0.12
SRP54-201ENST00000216774 MAP3K11Q16584 847 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 MYRIPQ8NFW9 859 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 KLHDC4Q8TBB5 520 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms