RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 STK32BQ9NY57 414 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
RTCB-201ENST00000216038 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 UBTFL1P0CB47 393 aaPredicted RBP12.49□□□□□ -0.41
RTCB-201ENST00000216038 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
RTCB-201ENST00000216038 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
RTCB-201ENST00000216038 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 GRM8O00222 908 aa12.48□□□□□ -0.41
RTCB-201ENST00000216038 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
RTCB-201ENST00000216038 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
RTCB-201ENST00000216038 ZNF34Q8IZ26 560 aa12.48□□□□□ -0.41
RTCB-201ENST00000216038 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
RTCB-201ENST00000216038 GYS1P13807 737 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 HMGB2P26583 209 aaKnown RBP12.47□□□□□ -0.41
RTCB-201ENST00000216038 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
RTCB-201ENST00000216038 GNAI3P08754 354 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 SUSD4Q5VX71 490 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 MSL1Q68DK7 614 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
RTCB-201ENST00000216038 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
RTCB-201ENST00000216038 CCDC136Q96JN2 1154 aa12.46□□□□□ -0.41
RTCB-201ENST00000216038 GNAI2P04899 355 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
RTCB-201ENST00000216038 NBR1Q14596 966 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 SUCLG2Q96I99 432 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
RTCB-201ENST00000216038 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 NFIXQ14938 502 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
RTCB-201ENST00000216038 CHMP4BQ9H444 224 aaKnown RBP12.45□□□□□ -0.42
RTCB-201ENST00000216038 H7C1W4 665 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
RTCB-201ENST00000216038 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 UTYO14607 1347 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 CASP7P55210 303 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
RTCB-201ENST00000216038 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
RTCB-201ENST00000216038 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
RTCB-201ENST00000216038 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
RTCB-201ENST00000216038 IGHDP01880 384 aa12.43□□□□□ -0.42
RTCB-201ENST00000216038 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
RTCB-201ENST00000216038 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
RTCB-201ENST00000216038 R3HDM1Q15032 1099 aaKnown RBP12.43□□□□□ -0.42
RTCB-201ENST00000216038 PARP10Q53GL7 1025 aa12.43□□□□□ -0.42
RTCB-201ENST00000216038 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
RTCB-201ENST00000216038 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
RTCB-201ENST00000216038 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
RTCB-201ENST00000216038 PNMA6EA0A0J9YXQ4 647 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 NPHP1O15259 732 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 NTSR2O95665 410 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
RTCB-201ENST00000216038 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
RTCB-201ENST00000216038 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
RTCB-201ENST00000216038 AAMPQ13685 434 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 ERFEQ4G0M1 354 aa12.42□□□□□ -0.42
RTCB-201ENST00000216038 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 UTRNP46939 3433 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 DDR1Q08345 913 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
RTCB-201ENST00000216038 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
RTCB-201ENST00000216038 RGL2O15211 777 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 MMP10P09238 476 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 TM4SF1P30408 202 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 FOXO4P98177 505 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 LMBR1LQ6UX01 489 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 MYH3P11055 1940 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
RTCB-201ENST00000216038 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
RTCB-201ENST00000216038 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
RTCB-201ENST00000216038 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 SERPINB2P05120 415 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
RTCB-201ENST00000216038 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
RTCB-201ENST00000216038 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
RTCB-201ENST00000216038 APBB1O00213 710 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms