RNA–Protein interactions for RNA: ENST00000204604.5

CHRD-201, Transcript of chordin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRD, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-201ENST00000204604 SCAND2PQ9GZW5 306 aaPredicted RBP18.72■□□□□ 0.59
CHRD-201ENST00000204604 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
CHRD-201ENST00000204604 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
CHRD-201ENST00000204604 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
CHRD-201ENST00000204604 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
CHRD-201ENST00000204604 DNAJC2Q99543 621 aaKnown RBP18.71■□□□□ 0.59
CHRD-201ENST00000204604 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 ZSWIM6Q9HCJ5 1215 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 A0A087WWV3 80 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
CHRD-201ENST00000204604 HOXC9P31274 260 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 JAK2O60674 1132 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
CHRD-201ENST00000204604 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
CHRD-201ENST00000204604 NR1I2O75469 434 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
CHRD-201ENST00000204604 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
CHRD-201ENST00000204604 DMTNQ08495 405 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 POLA2Q14181 598 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
CHRD-201ENST00000204604 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
CHRD-201ENST00000204604 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 FUCA2Q9BTY2 467 aa18.69■□□□□ 0.58
CHRD-201ENST00000204604 USP6P35125 1406 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 ERCC4Q92889 916 aaPredicted RBP18.68■□□□□ 0.58
CHRD-201ENST00000204604 A0A0D9SFI3 127 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 MYL6BP14649 208 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 ANKRD1Q15327 319 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 BRF1Q92994 677 aa18.68■□□□□ 0.58
CHRD-201ENST00000204604 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
CHRD-201ENST00000204604 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
CHRD-201ENST00000204604 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
CHRD-201ENST00000204604 TAF6LQ9Y6J9 622 aa18.67■□□□□ 0.58
CHRD-201ENST00000204604 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
CHRD-201ENST00000204604 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
CHRD-201ENST00000204604 EAF2Q96CJ1 260 aaPredicted RBP18.66■□□□□ 0.58
CHRD-201ENST00000204604 ZNF75DP51815 510 aa18.66■□□□□ 0.58
CHRD-201ENST00000204604 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
CHRD-201ENST00000204604 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
CHRD-201ENST00000204604 LTKP29376 864 aa18.66■□□□□ 0.58
CHRD-201ENST00000204604 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
CHRD-201ENST00000204604 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
CHRD-201ENST00000204604 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
CHRD-201ENST00000204604 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
CHRD-201ENST00000204604 HIP1O00291 1037 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHRD-201ENST00000204604 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
CHRD-201ENST00000204604 ST3GAL1Q11201 340 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 ARID5BQ14865 1188 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 ME1P48163 572 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 CEP135Q66GS9 1140 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 CACTINQ8WUQ7 758 aaKnown RBP18.65■□□□□ 0.58
CHRD-201ENST00000204604 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
CHRD-201ENST00000204604 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
CHRD-201ENST00000204604 CHMP4AQ9BY43 222 aa18.64■□□□□ 0.57
CHRD-201ENST00000204604 TM6SF1Q9BZW5 370 aa18.64■□□□□ 0.57
CHRD-201ENST00000204604 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
CHRD-201ENST00000204604 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.57
CHRD-201ENST00000204604 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
CHRD-201ENST00000204604 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
CHRD-201ENST00000204604 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
CHRD-201ENST00000204604 BICC1Q9H694 974 aaKnown RBP18.64■□□□□ 0.57
CHRD-201ENST00000204604 PTPN14Q15678 1187 aa18.63■□□□□ 0.57
CHRD-201ENST00000204604 RPS6KB1P23443 525 aa18.63■□□□□ 0.57
CHRD-201ENST00000204604 FTOQ9C0B1 505 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHRD-201ENST00000204604 OVOS2A0A0J9YW53 1432 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 OVOS2Q6IE36 1432 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 SKILP12757 684 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 Q6ZUG5 572 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 ZNF589Q86UQ0 364 aaPredicted RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 CLSTN2Q9H4D0 955 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 GORABQ5T7V8 394 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 CCAR1Q8IX12 1150 aaKnown RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 NEUROD6Q96NK8 337 aa18.62■□□□□ 0.57
CHRD-201ENST00000204604 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
CHRD-201ENST00000204604 NEK1Q96PY6 1258 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms