RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 USP19O94966 1318 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 HIP1O00291 1037 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■□□□ 14.1
DNMT3B-201ENST00000201963 H0YHG0 523 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 GPTP24298 496 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 TIGD1Q96MW7 591 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 PTGS1P23219 599 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 BAG6P46379 1132 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 PDE1AP54750 535 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 TSPYL6Q8N831 410 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 CHAMP1Q96JM3 812 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 JCADQ9P266 1359 aa13.52□□□□□ -0.24
DNMT3B-201ENST00000201963 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 AACSQ86V21 672 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 ANKRD20A12PQ8NF67 263 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 PCMTD1Q96MG8 357 aaPredicted RBP13.52□□□□□ -0.25
DNMT3B-201ENST00000201963 AKAP17AQ02040 695 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 PKP1Q13835 747 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 ANKRD44Q8N8A2 993 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 PAXBP1Q9Y5B6 917 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 ZNF500O60304 480 aaPredicted RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 DDX19AQ9NUU7 478 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 UNC13BO14795 1591 aa13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
DNMT3B-201ENST00000201963 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 ESYT1Q9BSJ8 1104 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 RUFY1Q96T51 708 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 DCTPP1Q9H773 170 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 RFC4P35249 363 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 KIF20AO95235 890 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
DNMT3B-201ENST00000201963 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 ANO10Q9NW15 660 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 PTPRUQ92729 1446 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 VAMP4O75379 141 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 SKILP12757 684 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 ERCC4Q92889 916 aaPredicted RBP13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
DNMT3B-201ENST00000201963 INSRP06213 1382 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 CD2BP2O95400 341 aaKnown RBP13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 LMTK2Q8IWU2 1503 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 SPHKAPQ2M3C7 1700 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 MYOM2P54296 1465 aa13.48□□□□□ -0.25
DNMT3B-201ENST00000201963 PATL2C9JE40 543 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 NEMFO60524 1076 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 DTNBO60941 627 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 GNPATO15228 680 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 F13A1P00488 732 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 FEZ1Q99689 392 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms