RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 CNKSR1Q969H4 720 aa22.37■■□□□ 1.17
MRPL28-201ENST00000199706 LAMB2P55268 1798 aa22.36■■□□□ 1.17
MRPL28-201ENST00000199706 NPR1P16066 1061 aa22.36■■□□□ 1.17
MRPL28-201ENST00000199706 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
MRPL28-201ENST00000199706 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
MRPL28-201ENST00000199706 ADCY9O60503 1353 aa22.35■■□□□ 1.17
MRPL28-201ENST00000199706 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
MRPL28-201ENST00000199706 ERFEQ4G0M1 354 aa22.34■■□□□ 1.17
MRPL28-201ENST00000199706 RIC3Q7Z5B4 369 aa22.34■■□□□ 1.17
MRPL28-201ENST00000199706 CCDC24Q8N4L8 307 aa22.34■■□□□ 1.17
MRPL28-201ENST00000199706 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
MRPL28-201ENST00000199706 SH3TC1Q8TE82 1336 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 FER1L6Q2WGJ9 1857 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 SLC4A2P04920 1241 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.17
MRPL28-201ENST00000199706 KSR2Q6VAB6 950 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 TRMT2AQ8IZ69 625 aaKnown RBP22.33■■□□□ 1.17
MRPL28-201ENST00000199706 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
MRPL28-201ENST00000199706 CACNA1SQ13698 1873 aa22.32■■□□□ 1.16
MRPL28-201ENST00000199706 DDX60Q8IY21 1712 aaKnown RBP22.32■■□□□ 1.16
MRPL28-201ENST00000199706 FAM177BA6PVY3 158 aa22.32■■□□□ 1.16
MRPL28-201ENST00000199706 SOGA3Q5TF21 947 aa22.32■■□□□ 1.16
MRPL28-201ENST00000199706 METTL22Q9BUU2 404 aaPredicted RBP22.32■■□□□ 1.16
MRPL28-201ENST00000199706 SBF1O95248 1867 aa22.32■■□□□ 1.16
MRPL28-201ENST00000199706 FLIIQ13045 1269 aa22.31■■□□□ 1.16
MRPL28-201ENST00000199706 CCDC191Q8NCU4 936 aa22.31■■□□□ 1.16
MRPL28-201ENST00000199706 ZNF622Q969S3 477 aaKnown RBP eCLIP22.31■■□□□ 1.16
MRPL28-201ENST00000199706 CT47B1P0C2W7 299 aaPredicted RBP22.3■■□□□ 1.16
MRPL28-201ENST00000199706 ALDH1B1P30837 517 aa22.3■■□□□ 1.16
MRPL28-201ENST00000199706 PRPF40BQ6NWY9 871 aaKnown RBP22.3■■□□□ 1.16
MRPL28-201ENST00000199706 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
MRPL28-201ENST00000199706 ARHGAP27Q6ZUM4 889 aa22.29■■□□□ 1.16
MRPL28-201ENST00000199706 NLRP3Q96P20 1036 aa22.29■■□□□ 1.16
MRPL28-201ENST00000199706 LTBP3Q9NS15 1303 aa22.29■■□□□ 1.16
MRPL28-201ENST00000199706 PI4KAP2A4QPH2 592 aa22.28■■□□□ 1.16
MRPL28-201ENST00000199706 HSP90B1P14625 803 aaKnown RBP22.28■■□□□ 1.16
MRPL28-201ENST00000199706 PI4KAP1Q8N8J0 262 aa22.28■■□□□ 1.16
MRPL28-201ENST00000199706 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
MRPL28-201ENST00000199706 MAP3K2Q9Y2U5 619 aa22.28■■□□□ 1.16
MRPL28-201ENST00000199706 G2E3Q7L622 706 aa22.27■■□□□ 1.16
MRPL28-201ENST00000199706 C7orf43Q8WVR3 580 aa22.27■■□□□ 1.16
MRPL28-201ENST00000199706 RPGRQ92834 1020 aaKnown RBP22.27■■□□□ 1.16
MRPL28-201ENST00000199706 ZC3H4Q9UPT8 1303 aaKnown RBP22.27■■□□□ 1.16
MRPL28-201ENST00000199706 ATP5J2-PTCD1G3V325 749 aa22.26■■□□□ 1.15
MRPL28-201ENST00000199706 NEXNQ0ZGT2 675 aa22.26■■□□□ 1.15
MRPL28-201ENST00000199706 ZBTB38Q8NAP3 1195 aaPredicted RBP22.26■■□□□ 1.15
MRPL28-201ENST00000199706 MYD88Q99836 296 aa22.26■■□□□ 1.15
MRPL28-201ENST00000199706 CWC25Q9NXE8 425 aaPredicted RBP22.26■■□□□ 1.15
MRPL28-201ENST00000199706 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
MRPL28-201ENST00000199706 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
MRPL28-201ENST00000199706 CC2D2BQ6DHV5 1058 aa22.25■■□□□ 1.15
MRPL28-201ENST00000199706 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
MRPL28-201ENST00000199706 SNED1Q8TER0 1413 aa22.24■■□□□ 1.15
MRPL28-201ENST00000199706 TCERG1O14776 1098 aaKnown RBP22.24■■□□□ 1.15
MRPL28-201ENST00000199706 PCCAP05165 728 aaPredicted RBP22.24■■□□□ 1.15
MRPL28-201ENST00000199706 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
MRPL28-201ENST00000199706 RBM17Q96I25 401 aaKnown RBP22.24■■□□□ 1.15
MRPL28-201ENST00000199706 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
MRPL28-201ENST00000199706 C3orf67Q6ZVT6 689 aa22.23■■□□□ 1.15
MRPL28-201ENST00000199706 ZNF784Q8NCA9 323 aaPredicted RBP22.23■■□□□ 1.15
MRPL28-201ENST00000199706 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
MRPL28-201ENST00000199706 CDHR2Q9BYE9 1310 aa22.23■■□□□ 1.15
MRPL28-201ENST00000199706 MYH3P11055 1940 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 NFKBIEO00221 500 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 C21orf2O43822 256 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 IGKV5-2P06315 115 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 LMNB1P20700 586 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 SF3B3Q15393 1217 aaKnown RBP22.22■■□□□ 1.15
MRPL28-201ENST00000199706 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 LINS1Q8NG48 757 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 FAM89AQ96GI7 184 aa22.22■■□□□ 1.15
MRPL28-201ENST00000199706 NEURL1BA8MQ27 555 aa22.21■■□□□ 1.15
MRPL28-201ENST00000199706 CCDC88AQ3V6T2 1871 aa22.21■■□□□ 1.15
MRPL28-201ENST00000199706 LRRC37AA6NMS7 1700 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 IRS4O14654 1257 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-201ENST00000199706 HCLS1P14317 486 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-201ENST00000199706 TMC4Q7Z404 712 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 RTKN2Q8IZC4 609 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
MRPL28-201ENST00000199706 C9orf131Q5VYM1 1079 aa22.19■■□□□ 1.14
MRPL28-201ENST00000199706 ABCC4O15439 1325 aa22.19■■□□□ 1.14
MRPL28-201ENST00000199706 PTPRCP08575 1304 aa22.19■■□□□ 1.14
MRPL28-201ENST00000199706 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
MRPL28-201ENST00000199706 BBOX1O75936 387 aa22.18■■□□□ 1.14
MRPL28-201ENST00000199706 BRPF1P55201 1214 aaPredicted RBP22.18■■□□□ 1.14
MRPL28-201ENST00000199706 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
MRPL28-201ENST00000199706 GCKRQ14397 625 aa22.17■■□□□ 1.14
MRPL28-201ENST00000199706 DDX46Q7L014 1031 aaKnown RBP22.17■■□□□ 1.14
MRPL28-201ENST00000199706 MRPL50Q8N5N7 158 aaKnown RBP22.17■■□□□ 1.14
MRPL28-201ENST00000199706 PSMD1Q99460 953 aa22.17■■□□□ 1.14
MRPL28-201ENST00000199706 PPEF1O14829 653 aaPredicted RBP22.16■■□□□ 1.14
MRPL28-201ENST00000199706 PDE8AO60658 829 aa22.16■■□□□ 1.14
MRPL28-201ENST00000199706 RASSF7Q02833 373 aa22.16■■□□□ 1.14
MRPL28-201ENST00000199706 GRAPQ13588 217 aa22.16■■□□□ 1.14
MRPL28-201ENST00000199706 GRAPLQ8TC17 118 aaPredicted RBP22.16■■□□□ 1.14
MRPL28-201ENST00000199706 SSH1Q8WYL5 1049 aa22.16■■□□□ 1.14
MRPL28-201ENST00000199706 RNF181Q9P0P0 153 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms