RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 BEND3Q5T5X7 828 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 PDRG1Q9NUG6 133 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 ZKSCAN5Q9Y2L8 839 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 PHKG2P15735 406 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 ZSCAN23Q3MJ62 389 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
PCDHB4-201ENST00000194152 ERBB3P21860 1342 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 CYP27B1O15528 508 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 DMTNQ08495 405 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 EAF2Q96CJ1 260 aaPredicted RBP15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 SEC62Q99442 399 aaKnown RBP15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 ERICH4A6NGS2 130 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 TTC39AQ5SRH9 613 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
PCDHB4-201ENST00000194152 ERC1Q8IUD2 1116 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 NOL7Q9UMY1 257 aaKnown RBP15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 METTL24Q5JXM2 366 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 KIF3AQ9Y496 699 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 IL2RBP14784 551 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 BLOC1S2Q6QNY1 142 aa15.35■□□□□ 0.05
PCDHB4-201ENST00000194152 EXOC5O00471 708 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 KIAA1210Q9ULL0 1709 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 KLHL40Q2TBA0 621 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
PCDHB4-201ENST00000194152 IFIT1P09914 478 aaKnown RBP15.33■□□□□ 0.05
PCDHB4-201ENST00000194152 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.05
PCDHB4-201ENST00000194152 PPP1R9BQ96SB3 815 aa15.33■□□□□ 0.05
PCDHB4-201ENST00000194152 ABCF2Q9UG63 623 aa15.33■□□□□ 0.05
PCDHB4-201ENST00000194152 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 PTH1RQ03431 593 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 CAMK4Q16566 473 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 LDHAL6AQ6ZMR3 332 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 RBM8AQ9Y5S9 174 aaKnown RBP15.33■□□□□ 0.04
PCDHB4-201ENST00000194152 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 CWC25Q9NXE8 425 aaPredicted RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 MEX3CQ5U5Q3 659 aaKnown RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 IL25Q9H293 177 aa15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 COL3A1P02461 1466 aaPredicted RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 GCKRQ14397 625 aa15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 TTC12Q9H892 705 aaPredicted RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 CEP170BQ9Y4F5 1589 aaPredicted RBP15.32■□□□□ 0.04
PCDHB4-201ENST00000194152 SNAP23O00161 211 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 AK2P54819 239 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 STARD3NLO95772 234 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 U2AF2P26368 475 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 PHF14O94880 888 aa15.31■□□□□ 0.04
PCDHB4-201ENST00000194152 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 SPC24Q8NBT2 197 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 ATP6V1DQ9Y5K8 247 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 NEURL1BA8MQ27 555 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 CPLX1O14810 134 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 SSH3Q8TE77 659 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 MPHOSPH8Q99549 860 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 CRB1P82279 1406 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
PCDHB4-201ENST00000194152 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
PCDHB4-201ENST00000194152 HMGN5P82970 282 aaKnown RBP15.29■□□□□ 0.04
PCDHB4-201ENST00000194152 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
PCDHB4-201ENST00000194152 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
PCDHB4-201ENST00000194152 ALDH1L1O75891 902 aa15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 LETM1O95202 739 aaPredicted RBP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms