RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
CDK13-201ENST00000181839 HARSP12081 509 aaKnown RBP20.6■□□□□ 0.89
CDK13-201ENST00000181839 MFSD6Q6ZSS7 791 aa20.6■□□□□ 0.89
CDK13-201ENST00000181839 KIF1BPQ96EK5 621 aa20.6■□□□□ 0.89
CDK13-201ENST00000181839 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
CDK13-201ENST00000181839 ATP2C2O75185 946 aa20.6■□□□□ 0.89
CDK13-201ENST00000181839 ARID5AQ03989 594 aa20.6■□□□□ 0.89
CDK13-201ENST00000181839 RNF41Q9H4P4 317 aaPredicted RBP20.6■□□□□ 0.89
CDK13-201ENST00000181839 SLU7O95391 586 aaKnown RBP20.59■□□□□ 0.89
CDK13-201ENST00000181839 JDP2Q8WYK2 163 aa20.59■□□□□ 0.89
CDK13-201ENST00000181839 KIF5BP33176 963 aa20.59■□□□□ 0.89
CDK13-201ENST00000181839 CFAP58Q5T655 872 aa20.59■□□□□ 0.89
CDK13-201ENST00000181839 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
CDK13-201ENST00000181839 SHTN1A0MZ66 631 aa20.59■□□□□ 0.89
CDK13-201ENST00000181839 AMPD3Q01432 767 aa20.58■□□□□ 0.89
CDK13-201ENST00000181839 HSP90AA4PQ58FG1 418 aa20.58■□□□□ 0.89
CDK13-201ENST00000181839 CCDC50Q8IVM0 306 aa20.58■□□□□ 0.89
CDK13-201ENST00000181839 EXOC1Q9NV70 894 aa20.58■□□□□ 0.89
CDK13-201ENST00000181839 PAFAH1B1P43034 410 aa20.58■□□□□ 0.89
CDK13-201ENST00000181839 GABPAQ06546 454 aa20.58■□□□□ 0.88
CDK13-201ENST00000181839 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.88
CDK13-201ENST00000181839 FAM107BQ9H098 131 aa20.58■□□□□ 0.88
CDK13-201ENST00000181839 PHAXQ9H814 394 aaKnown RBP20.58■□□□□ 0.88
CDK13-201ENST00000181839 CCDC175P0C221 793 aa20.58■□□□□ 0.88
CDK13-201ENST00000181839 KMT5BQ4FZB7 885 aa20.58■□□□□ 0.88
CDK13-201ENST00000181839 POLR3GO15318 223 aaPredicted RBP20.57■□□□□ 0.88
CDK13-201ENST00000181839 RASA3Q14644 834 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
CDK13-201ENST00000181839 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 SMARCC2Q8TAQ2 1214 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 PPP2R5CQ13362 524 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 SNX16P57768 344 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 SPATA24Q86W54 205 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 JADE2Q9NQC1 790 aa20.57■□□□□ 0.88
CDK13-201ENST00000181839 RNF34Q969K3 372 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
CDK13-201ENST00000181839 NOP9Q86U38 636 aaKnown RBP20.56■□□□□ 0.88
CDK13-201ENST00000181839 ZNF710Q8N1W2 664 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 LDHCP07864 332 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 AFMP43652 599 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 IFIT1BQ5T764 474 aaKnown RBP20.56■□□□□ 0.88
CDK13-201ENST00000181839 YEATS4O95619 227 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 GSTO1P78417 241 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 SREK1Q8WXA9 508 aaKnown RBP20.56■□□□□ 0.88
CDK13-201ENST00000181839 UBXN4Q92575 508 aa20.56■□□□□ 0.88
CDK13-201ENST00000181839 TRERF1Q96PN7 1200 aa20.55■□□□□ 0.88
CDK13-201ENST00000181839 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
CDK13-201ENST00000181839 CYP7A1P22680 504 aa20.55■□□□□ 0.88
CDK13-201ENST00000181839 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
CDK13-201ENST00000181839 UBA7P41226 1012 aa20.55■□□□□ 0.88
CDK13-201ENST00000181839 MVPQ14764 893 aaKnown RBP20.55■□□□□ 0.88
CDK13-201ENST00000181839 CCDC65Q8IXS2 484 aa20.54■□□□□ 0.88
CDK13-201ENST00000181839 TMCO4Q5TGY1 634 aa20.54■□□□□ 0.88
CDK13-201ENST00000181839 NACA2Q9H009 215 aa20.54■□□□□ 0.88
CDK13-201ENST00000181839 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
CDK13-201ENST00000181839 FAM13AO94988 1023 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
CDK13-201ENST00000181839 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDK13-201ENST00000181839 PFDN4Q9NQP4 134 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 KRT13P13646 458 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 MX1P20591 662 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 BACH1O14867 736 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
CDK13-201ENST00000181839 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
CDK13-201ENST00000181839 TPD52P55327 224 aaPredicted RBP20.52■□□□□ 0.88
CDK13-201ENST00000181839 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
CDK13-201ENST00000181839 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 IQCGQ9H095 443 aaKnown RBP20.52■□□□□ 0.88
CDK13-201ENST00000181839 FSIP1Q8NA03 581 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 ZSWIM4Q9H7M6 989 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 MAP9Q49MG5 647 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 SFPQP23246 707 aaKnown RBP eCLIP20.52■□□□□ 0.88
CDK13-201ENST00000181839 TFIP11Q9UBB9 837 aaKnown RBP20.52■□□□□ 0.88
CDK13-201ENST00000181839 RAB11FIP3O75154 756 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 GEN1Q17RS7 908 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 SLC4A4Q9Y6R1 1079 aa20.52■□□□□ 0.88
CDK13-201ENST00000181839 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.87
CDK13-201ENST00000181839 USP16Q9Y5T5 823 aa20.52■□□□□ 0.87
CDK13-201ENST00000181839 CCDC160A6NGH7 325 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 KCNA4P22459 653 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 UBE3BQ7Z3V4 1068 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 NME9Q86XW9 330 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 LPXNO60711 386 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 NFE2L2Q16236 605 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 SMC1BQ8NDV3 1235 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 SAP30BPQ9UHR5 308 aaKnown RBP20.51■□□□□ 0.87
CDK13-201ENST00000181839 NIP7Q9Y221 180 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDK13-201ENST00000181839 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
CDK13-201ENST00000181839 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 TRIM47Q96LD4 638 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 MAP7D1Q3KQU3 841 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 AMOTL2Q9Y2J4 779 aa20.51■□□□□ 0.87
CDK13-201ENST00000181839 CRCPO75575 148 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 STAT6P42226 847 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 TMC6Q7Z403 805 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms