RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
PTPN18-201ENST00000175756 HECW2Q9P2P5 1572 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
PTPN18-201ENST00000175756 ZC3H6P61129 1189 aaKnown RBP20.23■□□□□ 0.83
PTPN18-201ENST00000175756 TTC5Q8N0Z6 440 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 A0A087WWV3 80 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 JAK2O60674 1132 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 CCDC129Q6ZRS4 1044 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
PTPN18-201ENST00000175756 NRBP1Q9UHY1 535 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 ALKQ9UM73 1620 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 WASHC4Q2M389 1173 aa20.22■□□□□ 0.83
PTPN18-201ENST00000175756 ISM2Q6H9L7 571 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 ABCA9Q8IUA7 1624 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 MYO3AQ8NEV4 1616 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 CPLX1O14810 134 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 PPLO60437 1756 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 BIN1O00499 593 aa20.21■□□□□ 0.83
PTPN18-201ENST00000175756 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
PTPN18-201ENST00000175756 CPS1P31327 1500 aa20.2■□□□□ 0.82
PTPN18-201ENST00000175756 RAPGEF4Q8WZA2 1011 aa20.2■□□□□ 0.82
PTPN18-201ENST00000175756 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
PTPN18-201ENST00000175756 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
PTPN18-201ENST00000175756 CBX8Q9HC52 389 aa20.2■□□□□ 0.82
PTPN18-201ENST00000175756 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
PTPN18-201ENST00000175756 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
PTPN18-201ENST00000175756 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
PTPN18-201ENST00000175756 SLC27A2O14975 620 aa20.19■□□□□ 0.82
PTPN18-201ENST00000175756 PROSER3Q2NL68 480 aa20.19■□□□□ 0.82
PTPN18-201ENST00000175756 FAM177A1Q8N128 213 aaPredicted RBP20.19■□□□□ 0.82
PTPN18-201ENST00000175756 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 CCAR2Q8N163 923 aaKnown RBP20.18■□□□□ 0.82
PTPN18-201ENST00000175756 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 A0A0D9SFI3 127 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 GRM8O00222 908 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 Q6ZUG5 572 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 EAF2Q96CJ1 260 aaPredicted RBP20.18■□□□□ 0.82
PTPN18-201ENST00000175756 NEK1Q96PY6 1258 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
PTPN18-201ENST00000175756 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
PTPN18-201ENST00000175756 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
PTPN18-201ENST00000175756 ARHGEF28Q8N1W1 1705 aaKnown RBP20.18■□□□□ 0.82
PTPN18-201ENST00000175756 DDX19AQ9NUU7 478 aaKnown RBP20.17■□□□□ 0.82
PTPN18-201ENST00000175756 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 APPP05067 770 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
PTPN18-201ENST00000175756 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTPN18-201ENST00000175756 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 STK38Q15208 465 aa20.17■□□□□ 0.82
PTPN18-201ENST00000175756 KSR2Q6VAB6 950 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
PTPN18-201ENST00000175756 TOMM22Q9NS69 142 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 PHF8Q9UPP1 1060 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 TNRQ92752 1358 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 NR1I2O75469 434 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 TPM4P67936 248 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 PTPN14Q15678 1187 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 SUCLG2Q96I99 432 aa20.16■□□□□ 0.82
PTPN18-201ENST00000175756 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
PTPN18-201ENST00000175756 SYNE3Q6ZMZ3 975 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 CREBRFQ8IUR6 639 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 GOLIM4O00461 696 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 HAND2P61296 217 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 FSIP1Q8NA03 581 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 PIK3C2BO00750 1634 aa20.15■□□□□ 0.82
PTPN18-201ENST00000175756 COPS6Q7L5N1 327 aa20.14■□□□□ 0.82
PTPN18-201ENST00000175756 LEO1Q8WVC0 666 aaPredicted RBP20.14■□□□□ 0.82
PTPN18-201ENST00000175756 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.82
PTPN18-201ENST00000175756 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 ZSWIM6Q9HCJ5 1215 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 SNRKQ9NRH2 765 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 AOX1Q06278 1338 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
PTPN18-201ENST00000175756 KCNA6P17658 529 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 XAGE3Q8WTP9 111 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 TTC14Q96N46 770 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 NCOA5Q9HCD5 579 aaKnown RBP20.13■□□□□ 0.81
PTPN18-201ENST00000175756 CRB1P82279 1406 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 SSH2Q76I76 1423 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 SKILP12757 684 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
PTPN18-201ENST00000175756 ERICH4A6NGS2 130 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 ATP2B1P20020 1258 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 CDK11BP21127 795 aaKnown RBP20.13■□□□□ 0.81
PTPN18-201ENST00000175756 KRT32Q14532 448 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 KIAA1524Q8TCG1 905 aa20.13■□□□□ 0.81
PTPN18-201ENST00000175756 ARHGEF10O15013 1369 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 RPAP1Q9BWH6 1393 aaPredicted RBP20.12■□□□□ 0.81
PTPN18-201ENST00000175756 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 ZBTB9Q96C00 473 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms