RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 BTG4Q9NY30 223 aa31.56■■■□□ 2.64
RTN4R-201ENST00000043402 ZDHHC9Q9Y397 364 aa31.56■■■□□ 2.64
RTN4R-201ENST00000043402 H7C1W4 665 aa31.56■■■□□ 2.64
RTN4R-201ENST00000043402 NOL8Q76FK4 1167 aaKnown RBP31.56■■■□□ 2.64
RTN4R-201ENST00000043402 RUFY2Q8WXA3 655 aa31.55■■■□□ 2.64
RTN4R-201ENST00000043402 BOLA2Q9H3K6 86 aa31.55■■■□□ 2.64
RTN4R-201ENST00000043402 PTH1RQ03431 593 aa31.54■■■□□ 2.64
RTN4R-201ENST00000043402 FOXO4P98177 505 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 ZBTB3Q9H5J0 574 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 FSD2A1L4K1 749 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 TFCP2Q12800 502 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 LMBR1LQ6UX01 489 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 TMOD3Q9NYL9 352 aa31.53■■■□□ 2.64
RTN4R-201ENST00000043402 CWC25Q9NXE8 425 aaPredicted RBP31.51■■■□□ 2.64
RTN4R-201ENST00000043402 TJP1Q07157 1748 aa31.51■■■□□ 2.64
RTN4R-201ENST00000043402 PTMSP20962 102 aa31.51■■■□□ 2.63
RTN4R-201ENST00000043402 FAM227BQ96M60 508 aa31.51■■■□□ 2.63
RTN4R-201ENST00000043402 DBNLQ9UJU6 430 aaKnown RBP31.51■■■□□ 2.63
RTN4R-201ENST00000043402 TNNI3KQ59H18 835 aa31.5■■■□□ 2.63
RTN4R-201ENST00000043402 FPGT-TNNI3KV9GXZ4 949 aa31.5■■■□□ 2.63
RTN4R-201ENST00000043402 SKOR2Q2VWA4 1001 aaPredicted RBP31.5■■■□□ 2.63
RTN4R-201ENST00000043402 INTS4Q96HW7 963 aaKnown RBP31.49■■■□□ 2.63
RTN4R-201ENST00000043402 ASAP1Q9ULH1 1129 aa31.49■■■□□ 2.63
RTN4R-201ENST00000043402 PIGBQ92521 554 aa31.49■■■□□ 2.63
RTN4R-201ENST00000043402 TTC14Q96N46 770 aa31.49■■■□□ 2.63
RTN4R-201ENST00000043402 GOLGA6L22H0YM25 854 aa31.48■■■□□ 2.63
RTN4R-201ENST00000043402 NMIQ13287 307 aaPredicted RBP31.48■■■□□ 2.63
RTN4R-201ENST00000043402 GOLGA6L3A6NEY3 463 aa31.47■■■□□ 2.63
RTN4R-201ENST00000043402 L1TD1Q5T7N2 865 aaKnown RBP31.47■■■□□ 2.63
RTN4R-201ENST00000043402 MCTP1Q6DN14 999 aa31.46■■■□□ 2.63
RTN4R-201ENST00000043402 CCDC191Q8NCU4 936 aa31.46■■■□□ 2.63
RTN4R-201ENST00000043402 HIP1O00291 1037 aa31.46■■■□□ 2.63
RTN4R-201ENST00000043402 CCDC171Q6TFL3 1326 aa31.45■■■□□ 2.63
RTN4R-201ENST00000043402 EDC3Q96F86 508 aaKnown RBP31.45■■■□□ 2.63
RTN4R-201ENST00000043402 FSD1Q9BTV5 496 aa31.45■■■□□ 2.63
RTN4R-201ENST00000043402 SNRKQ9NRH2 765 aa31.45■■■□□ 2.63
RTN4R-201ENST00000043402 ATP5JP18859 108 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 KCNB2Q92953 911 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 ARXQ96QS3 562 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 CHMP3Q9Y3E7 222 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 DISP2A7MBM2 1401 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 A0A0D9SFI3 127 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 NECTIN1Q15223 517 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 PRPF40BQ6NWY9 871 aaKnown RBP31.44■■■□□ 2.62
RTN4R-201ENST00000043402 ATG3Q9NT62 314 aa31.44■■■□□ 2.62
RTN4R-201ENST00000043402 DNAJC10Q8IXB1 793 aa31.43■■■□□ 2.62
RTN4R-201ENST00000043402 ITGB4P16144 1822 aa31.43■■■□□ 2.62
RTN4R-201ENST00000043402 ADCK5Q3MIX3 580 aa31.43■■■□□ 2.62
RTN4R-201ENST00000043402 DBNDD2Q9BQY9 259 aa31.43■■■□□ 2.62
RTN4R-201ENST00000043402 COL14A1Q05707 1796 aaKnown RBP31.42■■■□□ 2.62
RTN4R-201ENST00000043402 CPA1P15085 419 aa31.42■■■□□ 2.62
RTN4R-201ENST00000043402 AK2P54819 239 aa31.42■■■□□ 2.62
RTN4R-201ENST00000043402 ATG9AQ7Z3C6 839 aa31.42■■■□□ 2.62
RTN4R-201ENST00000043402 ROBO1Q9Y6N7 1651 aa31.41■■■□□ 2.62
RTN4R-201ENST00000043402 XRCC6P12956 609 aaKnown RBP eCLIP31.41■■■□□ 2.62
RTN4R-201ENST00000043402 CASTP20810 708 aaKnown RBP31.41■■■□□ 2.62
RTN4R-201ENST00000043402 MAP4K1Q92918 833 aa31.41■■■□□ 2.62
RTN4R-201ENST00000043402 ISCA1Q9BUE6 129 aa31.41■■■□□ 2.62
RTN4R-201ENST00000043402 LMBRD1Q9NUN5 540 aa31.41■■■□□ 2.62
RTN4R-201ENST00000043402 VSIG10Q8N0Z9 540 aa31.4■■■□□ 2.62
RTN4R-201ENST00000043402 CHAMP1Q96JM3 812 aa31.4■■■□□ 2.62
RTN4R-201ENST00000043402 RBM8AQ9Y5S9 174 aaKnown RBP31.4■■■□□ 2.62
RTN4R-201ENST00000043402 NDUFB9Q9Y6M9 179 aa31.4■■■□□ 2.62
RTN4R-201ENST00000043402 BRD1O95696 1058 aa31.4■■■□□ 2.62
RTN4R-201ENST00000043402 RUFY3Q7L099 469 aa31.4■■■□□ 2.62
RTN4R-201ENST00000043402 ZNF330Q9Y3S2 320 aaPredicted RBP31.4■■■□□ 2.62
RTN4R-201ENST00000043402 KLHL40Q2TBA0 621 aa31.39■■■□□ 2.62
RTN4R-201ENST00000043402 FOXD4L5Q5VV16 416 aaPredicted RBP31.39■■■□□ 2.62
RTN4R-201ENST00000043402 FOXD4L4Q8WXT5 416 aaPredicted RBP31.39■■■□□ 2.62
RTN4R-201ENST00000043402 MED23Q9ULK4 1368 aa31.39■■■□□ 2.61
RTN4R-201ENST00000043402 LARP6Q9BRS8 491 aaKnown RBP31.39■■■□□ 2.61
RTN4R-201ENST00000043402 TCIRG1Q13488 830 aa31.38■■■□□ 2.61
RTN4R-201ENST00000043402 DDX49Q9Y6V7 483 aaKnown RBP31.38■■■□□ 2.61
RTN4R-201ENST00000043402 JAKMIP1Q96N16 626 aaKnown RBP31.37■■■□□ 2.61
RTN4R-201ENST00000043402 TEX13AQ9BXU3 409 aaPredicted RBP31.37■■■□□ 2.61
RTN4R-201ENST00000043402 COL16A1Q07092 1604 aaPredicted RBP31.37■■■□□ 2.61
RTN4R-201ENST00000043402 ZNF589Q86UQ0 364 aaPredicted RBP31.37■■■□□ 2.61
RTN4R-201ENST00000043402 CREB3L3Q68CJ9 461 aa31.36■■■□□ 2.61
RTN4R-201ENST00000043402 ZSWIM6Q9HCJ5 1215 aa31.36■■■□□ 2.61
RTN4R-201ENST00000043402 ZNF594Q96JF6 807 aaPredicted RBP31.36■■■□□ 2.61
RTN4R-201ENST00000043402 TM6SF1Q9BZW5 370 aa31.36■■■□□ 2.61
RTN4R-201ENST00000043402 LIMCH1Q9UPQ0 1083 aa31.36■■■□□ 2.61
RTN4R-201ENST00000043402 KAT6BQ8WYB5 2073 aa31.35■■■□□ 2.61
RTN4R-201ENST00000043402 LRRC24Q50LG9 513 aa31.34■■■□□ 2.61
RTN4R-201ENST00000043402 GAS2L3Q86XJ1 694 aa31.34■■■□□ 2.61
RTN4R-201ENST00000043402 SLC4A9Q96Q91 983 aa31.34■■■□□ 2.61
RTN4R-201ENST00000043402 BCL9O00512 1426 aa31.34■■■□□ 2.61
RTN4R-201ENST00000043402 HAUS7Q99871 368 aa31.34■■■□□ 2.61
RTN4R-201ENST00000043402 RTN4Q9NQC3 1192 aaKnown RBP31.34■■■□□ 2.61
RTN4R-201ENST00000043402 DNAJC2Q99543 621 aaKnown RBP31.33■■■□□ 2.61
RTN4R-201ENST00000043402 AHDC1Q5TGY3 1603 aaPredicted RBP31.33■■■□□ 2.61
RTN4R-201ENST00000043402 COL22A1Q8NFW1 1626 aaPredicted RBP31.33■■■□□ 2.61
RTN4R-201ENST00000043402 STARD3NLO95772 234 aa31.33■■■□□ 2.61
RTN4R-201ENST00000043402 CHGBP05060 677 aa31.33■■■□□ 2.61
RTN4R-201ENST00000043402 VPS53Q5VIR6 699 aa31.33■■■□□ 2.61
RTN4R-201ENST00000043402 SLC27A2O14975 620 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 ZKSCAN1P17029 563 aaPredicted RBP31.32■■■□□ 2.6
RTN4R-201ENST00000043402 IL15P40933 162 aaPredicted RBP31.32■■■□□ 2.6
RTN4R-201ENST00000043402 KCNJ4P48050 445 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 TRIM28Q13263 835 aaKnown RBP31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms