RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
CD4-201ENST00000011653 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.32
CD4-201ENST00000011653 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.32
CD4-201ENST00000011653 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.32
CD4-201ENST00000011653 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.32
CD4-201ENST00000011653 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.32
CD4-201ENST00000011653 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.32
CD4-201ENST00000011653 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.32
CD4-201ENST00000011653 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.32
CD4-201ENST00000011653 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
CD4-201ENST00000011653 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
CD4-201ENST00000011653 ANKRD44Q8N8A2 993 aa13.02□□□□□ -0.33
CD4-201ENST00000011653 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
CD4-201ENST00000011653 ALDH1L1O75891 902 aa13.02□□□□□ -0.33
CD4-201ENST00000011653 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
CD4-201ENST00000011653 TBC1D32Q96NH3 1257 aa13.02□□□□□ -0.33
CD4-201ENST00000011653 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
CD4-201ENST00000011653 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
CD4-201ENST00000011653 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
CD4-201ENST00000011653 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
CD4-201ENST00000011653 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
CD4-201ENST00000011653 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
CD4-201ENST00000011653 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
CD4-201ENST00000011653 ZPR1O75312 459 aa13□□□□□ -0.33
CD4-201ENST00000011653 HMMRO75330 724 aa13□□□□□ -0.33
CD4-201ENST00000011653 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
CD4-201ENST00000011653 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
CD4-201ENST00000011653 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
CD4-201ENST00000011653 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
CD4-201ENST00000011653 RFC4P35249 363 aa13□□□□□ -0.33
CD4-201ENST00000011653 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
CD4-201ENST00000011653 PROM2Q8N271 834 aa13□□□□□ -0.33
CD4-201ENST00000011653 SLKQ9H2G2 1235 aaPredicted RBP13□□□□□ -0.33
CD4-201ENST00000011653 COL15A1P39059 1388 aa13□□□□□ -0.33
CD4-201ENST00000011653 BTAF1O14981 1849 aa13□□□□□ -0.33
CD4-201ENST00000011653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
CD4-201ENST00000011653 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
CD4-201ENST00000011653 UBR2Q8IWV8 1755 aa12.99□□□□□ -0.33
CD4-201ENST00000011653 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
CD4-201ENST00000011653 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
CD4-201ENST00000011653 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
CD4-201ENST00000011653 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
CD4-201ENST00000011653 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
CD4-201ENST00000011653 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
CD4-201ENST00000011653 SF3B2Q13435 895 aaKnown RBP12.98□□□□□ -0.33
CD4-201ENST00000011653 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
CD4-201ENST00000011653 EZH2Q15910 746 aaKnown RBP12.98□□□□□ -0.33
CD4-201ENST00000011653 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
CD4-201ENST00000011653 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
CD4-201ENST00000011653 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 CAMTA2O94983 1202 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
CD4-201ENST00000011653 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
CD4-201ENST00000011653 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
CD4-201ENST00000011653 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
CD4-201ENST00000011653 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
CD4-201ENST00000011653 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
CD4-201ENST00000011653 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.34
CD4-201ENST00000011653 MSL1Q68DK7 614 aa12.96□□□□□ -0.34
CD4-201ENST00000011653 SMC5Q8IY18 1101 aa12.96□□□□□ -0.34
CD4-201ENST00000011653 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.34
CD4-201ENST00000011653 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
CD4-201ENST00000011653 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 LAMB4A4D0S4 1761 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 TAF7LQ5H9L4 462 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
CD4-201ENST00000011653 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
CD4-201ENST00000011653 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
CD4-201ENST00000011653 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
CD4-201ENST00000011653 TJP1Q07157 1748 aa12.94□□□□□ -0.34
CD4-201ENST00000011653 H7C1W4 665 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 ERVV-1B6SEH8 477 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 NUCB1Q02818 461 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 G3BP1Q13283 466 aaKnown RBP eCLIP12.93□□□□□ -0.34
CD4-201ENST00000011653 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
CD4-201ENST00000011653 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
CD4-201ENST00000011653 C22orf23Q9BZE7 217 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
CD4-201ENST00000011653 NHSQ6T4R5 1651 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
CD4-201ENST00000011653 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
CD4-201ENST00000011653 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
CD4-201ENST00000011653 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
CD4-201ENST00000011653 CCDC57Q2TAC2 916 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
CD4-201ENST00000011653 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms