RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
CD9-201ENST00000009180 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
CD9-201ENST00000009180 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 NEXNQ0ZGT2 675 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
CD9-201ENST00000009180 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
CD9-201ENST00000009180 LRP5O75197 1615 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
CD9-201ENST00000009180 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
CD9-201ENST00000009180 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
CD9-201ENST00000009180 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
CD9-201ENST00000009180 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
CD9-201ENST00000009180 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
CD9-201ENST00000009180 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
CD9-201ENST00000009180 ABCC4O15439 1325 aa12.78□□□□□ -0.36
CD9-201ENST00000009180 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
CD9-201ENST00000009180 NPHP1O15259 732 aa12.77□□□□□ -0.37
CD9-201ENST00000009180 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
CD9-201ENST00000009180 RLBP1P12271 317 aa12.77□□□□□ -0.37
CD9-201ENST00000009180 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.37
CD9-201ENST00000009180 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
CD9-201ENST00000009180 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
CD9-201ENST00000009180 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
CD9-201ENST00000009180 UTP14AQ9BVJ6 771 aaKnown RBP12.77□□□□□ -0.37
CD9-201ENST00000009180 TRMT112Q9UI30 125 aaKnown RBP12.77□□□□□ -0.37
CD9-201ENST00000009180 IBTKQ9P2D0 1353 aaPredicted RBP12.77□□□□□ -0.37
CD9-201ENST00000009180 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CD9-201ENST00000009180 GCKRQ14397 625 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 PPP1R42Q7Z4L9 355 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 CCDC191Q8NCU4 936 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
CD9-201ENST00000009180 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
CD9-201ENST00000009180 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
CD9-201ENST00000009180 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
CD9-201ENST00000009180 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
CD9-201ENST00000009180 ST5P78524 1137 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 UBE3BQ7Z3V4 1068 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 TMEM57Q8N5G2 664 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
CD9-201ENST00000009180 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
CD9-201ENST00000009180 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
CD9-201ENST00000009180 ANKRD31Q8N7Z5 1873 aa12.74□□□□□ -0.37
CD9-201ENST00000009180 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
CD9-201ENST00000009180 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
CD9-201ENST00000009180 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
CD9-201ENST00000009180 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
CD9-201ENST00000009180 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
CD9-201ENST00000009180 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
CD9-201ENST00000009180 CHRNA5P30532 468 aa12.73□□□□□ -0.37
CD9-201ENST00000009180 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
CD9-201ENST00000009180 CASP7P55210 303 aa12.73□□□□□ -0.37
CD9-201ENST00000009180 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
CD9-201ENST00000009180 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
CD9-201ENST00000009180 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 LAMB2P55268 1798 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 H7C1W4 665 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 GRM8O00222 908 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 NBPF7P0C2Y1 421 aaPredicted RBP12.72□□□□□ -0.37
CD9-201ENST00000009180 MEIS3Q99687 375 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 C9orf78Q9NZ63 289 aaPredicted RBP12.72□□□□□ -0.37
CD9-201ENST00000009180 WWC3Q9ULE0 1092 aa12.72□□□□□ -0.37
CD9-201ENST00000009180 DPEP1P16444 411 aa12.71□□□□□ -0.37
CD9-201ENST00000009180 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.37
CD9-201ENST00000009180 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
CD9-201ENST00000009180 BRIP1Q9BX63 1249 aa12.71□□□□□ -0.37
CD9-201ENST00000009180 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
CD9-201ENST00000009180 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
CD9-201ENST00000009180 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
CD9-201ENST00000009180 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
CD9-201ENST00000009180 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 A0A0G2JLW4 131 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
CD9-201ENST00000009180 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 SUCLG2Q96I99 432 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
CD9-201ENST00000009180 SYT17Q9BSW7 474 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 COG6Q9Y2V7 657 aa12.7□□□□□ -0.38
CD9-201ENST00000009180 COL4A1P02462 1669 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms