RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Ccdc66Q6NS45 935 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Gys2Q8VCB3 704 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Cep57l1Q8VDS7 400 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Sytl4Q9R0Q1 673 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Mad1l1Q9WTX8 717 aaKnown RBP15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Gli3Q61602 1583 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Brpf3B2KF05 1204 aaKnown RBP15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Hmx1O70218 332 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Map3k2Q61083 619 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Btbd11Q6GQW0 1109 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Zfp251Q6PCX8 632 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Rps6kb1Q8BSK8 525 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Rbm42Q91V81 474 aaKnown RBP15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Hmg20bQ9Z104 317 aa15.59■□□□□ 0.09
Ssr1-203ENSMUST00000225246 Cdk4P30285 303 aa15.58■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Pa2g4P50580 394 aaKnown RBP15.58■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Tyro3P55144 880 aa15.58■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Rnf20Q5DTM8 973 aa15.58■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Hmgn5Q9JL35 406 aa15.58■□□□□ 0.08
Ssr1-203ENSMUST00000225246 CtifQ6PEE2 600 aaKnown RBP15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Slc35g1Q8BY79 368 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Amotl2Q8K371 772 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Plcd1Q8R3B1 756 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Bicc1Q99MQ1 977 aaKnown RBP15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ndufa8Q9DCJ5 172 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Fkbp4P30416 458 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Lins1Q3U1D0 764 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Irf9Q61179 399 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ppp1r37Q8BKR5 712 aa15.57■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ugt1a5B2RT14 529 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 F2rP30558 430 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Grm8P47743 908 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Morc2aQ69ZX6 1030 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Gimap6Q8K349 305 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 GckrQ91X44 587 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Bag3Q9JLV1 577 aaKnown RBP15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Nfe2l3Q9WTM4 660 aa15.56■□□□□ 0.08
Ssr1-203ENSMUST00000225246 C3P01027 1663 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Nkx2-3P97334 362 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Map3k13Q1HKZ5 959 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Cnnm3Q32NY4 713 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Polr3dQ91WD1 398 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Srgap1Q91Z69 1062 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Kcnh5Q920E3 988 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Zbtb22Q9Z0G7 638 aa15.55■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ms4a1P19437 291 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 RdxP26043 583 aaKnown RBP15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Cdkn1cP49919 348 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Babam1Q3UI43 333 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Taf7Q9R1C0 341 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Krt85Q9Z2T6 507 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ric1Q69ZJ7 1422 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Shank2Q80Z38 1476 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 TatQ8QZR1 454 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 StrbpQ91WM1 672 aaKnown RBP15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 TnmdQ9EP64 317 aa15.54■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Tmem2Q5FWI3 1383 aa15.53■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Dync1i1O88485 628 aa15.53■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Me3Q8BMF3 604 aa15.53■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ppm1mQ8BU27 406 aa15.53■□□□□ 0.08
Ssr1-203ENSMUST00000225246 PhaxQ9JJT9 385 aaKnown RBP15.53■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Oas2E9Q9A9 742 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Tmem109Q3UBX0 243 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Kiaa0753Q6A000 959 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Larp1Q6ZQ58 1072 aaKnown RBP15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 SympkQ80X82 1284 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Tsr2Q8C8T8 191 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Slc26a8Q8R0C3 999 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Ifi35Q9D8C4 286 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Topaz1E5FYH1 1653 aa15.52■□□□□ 0.08
Ssr1-203ENSMUST00000225246 Rimbp3Q3V0F0 1606 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Ddx60E9PZQ1 1711 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 TrdnE9Q9K5 693 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 1700113H08RikE9Q9Q5 327 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Mdm2P23804 489 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Stat1P42225 749 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Csrnp1P59054 583 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Sass6Q80UK7 654 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Ppp1r10Q80W00 888 aaKnown RBP15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 R3hcc1Q8BSI6 488 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Il1rapl2Q9ERS6 686 aa15.52■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Bcl9Q9D219 1425 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 MecomP14404 1042 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 CebpzP53569 1052 aaKnown RBP15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Nlrp9bQ66X22 1003 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Kank4Q6P9J5 1016 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Pip4k2bQ80XI4 416 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 ZwintQ9CQU5 252 aa15.51■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Trim30aP15533 496 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Ctdnep1Q3TP92 244 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Nek11Q8C0Q4 628 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Osbpl5Q9ER64 874 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 AceP09470 1312 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Slit1Q80TR4 1531 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Siglec1Q62230 1695 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Simc1E9Q6E9 1354 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Aox4Q3TYQ9 1336 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Cfap58B2RW38 873 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Tpd52l1O54818 204 aa15.5■□□□□ 0.07
Ssr1-203ENSMUST00000225246 Edc3Q8K2D3 508 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms