RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Hmgb1P63158 215 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ccdc162pQ0VG85 912 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 GpkowQ56A08 488 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Arhgef6Q8K4I3 771 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gigyf1Q99MR1 1044 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Haus2Q9CQS9 234 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Map3k5O35099 1380 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Caprin2Q05A80 1031 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ebag9Q9D0V7 213 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Syt10Q9R0N4 523 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Dhx9O70133 1380 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Grpel1Q99LP6 217 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rad50P70388 1312 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Serpinc1P32261 465 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Syt1P46096 421 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Wdhd1P59328 1117 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gtf3c5Q8R2T8 520 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 KdrP35918 1367 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Atp8b3Q6UQ17 1335 aa12.21□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gm10093D3YYI8 482 aa12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Hdac1O09106 482 aaKnown RBP12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Rfc1P35601 1131 aa12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 CebpzP53569 1052 aaKnown RBP12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Bicd1Q8BR07 835 aa12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Egfl6Q9JJZ5 550 aa12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Krt8P11679 490 aaKnown RBP12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 RragbQ6NTA4 374 aa12.21□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cplx4Q80WM3 160 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Dclk3Q8BWQ5 790 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ccdc91Q9D8L5 442 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Rai14Q9EP71 979 aaKnown RBP12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Kmt5bQ3U8K7 883 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Serpina10Q8R121 448 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ttc5Q99LG4 440 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tacc3Q9JJ11 631 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cct2P80314 535 aaKnown RBP12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Zfp397Q7TNK4 527 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ankrd24Q80VM7 985 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Syap1Q9D5V6 365 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 TnikP83510 1323 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Q3UPC7 1272 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gnat3Q3V3I2 354 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Bcar3Q9QZK2 820 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Fam186bD3Z420 943 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Neurog2P70447 263 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Zkscan4Q5SZT6 480 aa12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Spats2Q8K1N4 545 aaKnown RBP12.2□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gm10378F6XQQ1 160 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 GnaqP21279 359 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cnnm2Q3TWN3 875 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Slc38a10Q5I012 1090 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Bcl11bQ99PV8 884 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Nek5Q7TSC3 627 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Atp2a2O55143 1044 aaKnown RBP12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 CactinQ9CS00 772 aaKnown RBP12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Maip1Q8BHE8 291 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Mxra7Q9CZH7 178 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Armc9Q9D2I5 817 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Noc2lQ9WV70 747 aaKnown RBP12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Polr3aB2RXC6 1390 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tiam1Q60610 1591 aa12.19□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gpr161B2RPY5 545 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Mcm5P49718 733 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Micall1Q8BGT6 870 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Sec62Q8BU14 398 aaKnown RBP12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Kdm4aQ8BW72 1064 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Filip1Q9CS72 1211 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Dpf1Q9QX66 387 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Izumo3A6PWV3 263 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Q9D5Q8 446 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Mrc2Q64449 1479 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ms4a1P19437 291 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Kif5cP28738 956 aaKnown RBP12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Mtus1Q5HZI1 1210 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 SkiQ60698 725 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Hook2Q7TMK6 716 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ubxn1Q922Y1 297 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 AmfrQ9R049 643 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Eftud2O08810 971 aaKnown RBP12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gm21985Q6P6P5 1106 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Snx13Q6PHS6 957 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Haus1Q8BHX1 278 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 LifrP42703 1092 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tyro3P55144 880 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Senp1P59110 640 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Pde4dQ01063 747 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Zfp251Q6PCX8 632 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ccdc38Q8CDN8 563 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cib2Q9Z309 187 aa12.18□□□□□ -0.46
Vcan-202ENSMUST00000109544 SfswapQ3USH5 945 aaKnown RBP12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tsga10Q6NY15 697 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Klf15Q9EPW2 415 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gm7347D3YYI9 267 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Irf9Q61179 399 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Exoc1Q8R3S6 894 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 CenppQ9CZ92 286 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Mx2Q9WVP9 655 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ces1aE9PYP1 563 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Rimbp2Q80U40 1072 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms