RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Hip1rQ9JKY5 1068 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 PaskQ8CEE6 1383 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Nphp3Q7TNH6 1325 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Map3k2Q61083 619 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc82Q6PG04 518 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Matr3Q8K310 846 aaKnown RBP9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ankrd1Q9CR42 319 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rufy3Q9D394 469 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Stard3nlQ9DCI3 235 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 TefQ9JLC6 301 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ces1hD3Z298 562 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Jade2Q6ZQF7 829 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Cdca7lQ922M5 438 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Trim11Q99PQ2 467 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Arhgef40Q3UPH7 1517 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Arhgef12Q8R4H2 1543 aaKnown RBP9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Map3k11Q80XI6 850 aa9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Edc3Q8K2D3 508 aaKnown RBP9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Brpf3B2KF05 1204 aaKnown RBP9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Noc3lQ8VI84 807 aaKnown RBP9.62□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Diaph1O08808 1255 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Evi5P97366 809 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Arid5bQ8BM75 1188 aaKnown RBP9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ano2Q8CFW1 1002 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zcchc17Q9ESX4 241 aaKnown RBP9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Sbno1Q689Z5 1390 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Gm16486A0A1D5RMD1 1434 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zmym3Q9JLM4 1370 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Vwa3bJ9JI28 736 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ncapg2Q6DFV1 1138 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mum1Q6DID5 682 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Stac3Q8BZ71 360 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rbm19Q8R3C6 952 aaKnown RBP9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rai14Q9EP71 979 aaKnown RBP9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Golga5Q9QYE6 729 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Atp12aQ9Z1W8 1035 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rbbp8nlA2ABX0 614 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Dapk3O54784 448 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mmp8O70138 465 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc150Q8CDI7 1110 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Brd3Q8K2F0 726 aaKnown RBP9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rnf34Q99KR6 376 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Nfe2l3Q9WTM4 660 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Rad50P70388 1312 aa9.61□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zscan20B2KFW1 1030 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Sptlc2P97363 560 aaKnown RBP9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Txndc16Q7TN22 820 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Trerf1Q8BXJ2 1205 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zmynd15Q8C0R7 736 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Smc1aQ9CU62 1233 aaKnown RBP9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Xpo4Q9ESJ0 1151 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Exoc3l2D3YUP5 789 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Cdkl5Q3UTQ8 938 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc96Q9CR92 584 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ier5O89113 308 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ssh2Q5SW75 1423 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Cdca8Q8BHX3 289 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ptcd1Q8C2E4 695 aaKnown RBP9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Plcd1Q8R3B1 756 aa9.6□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ddit3P35639 168 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zdhhc9P59268 364 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Leo1Q5XJE5 667 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Soga3Q6NZL0 945 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Smarcc2Q6PDG5 1213 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Me3Q8BMF3 604 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Acot9Q9R0X4 439 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mybbp1aQ7TPV4 1344 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ncapd2Q8K2Z4 1392 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Samd9lQ69Z37 1561 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mex3cQ05A36 652 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tax1bp1Q3UKC1 814 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Cavin2Q63918 418 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Fkbp5Q64378 456 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tbc1d31Q6NXY1 996 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ppp1r10Q80W00 888 aaKnown RBP9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Lrrc8aQ80WG5 810 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 DymQ8CHY3 669 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Aldh1l2Q8K009 923 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Osbpl5Q9ER64 874 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 InsrP15208 1372 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Eif4a2P10630 407 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Stim1P70302 685 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Gbp4Q61107 620 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ift122Q6NWV3 1182 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Znf532Q6NXK2 1036 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Lmbrd2Q8C561 694 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mlh3A0A1Y7VMP7 1443 aa9.59□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Clec11aO88200 328 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 TrhQ62361 256 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Tmem132eQ6IEE6 982 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Q8BZJ8 459 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 ImmtQ8CAQ8 757 aaKnown RBP9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Krt84Q99M73 603 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Kiaa1211Q5PR69 1207 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Ccdc148Q6P5U8 527 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Sf3a3Q9D554 501 aaKnown RBP9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Fam50bQ9WTJ8 334 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Sel1lQ9Z2G6 790 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Cd22P35329 862 aa9.58□□□□□ -0.88
Smarca1-203ENSMUST00000101616 Gm21985Q6P6P5 1106 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms