RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ubxn10Q8BG34 277 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Inpp5bQ8K337 993 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Eif3aP23116 1344 aaKnown RBP11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Mst1rQ62190 1378 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ppp1r37Q8BKR5 712 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Sp8Q8BMJ8 486 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 CrebrfQ8CDG5 640 aaKnown RBP11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Rassf8Q8CJ96 419 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Fam13bQ8K2H3 851 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Psma5Q9Z2U1 241 aaKnown RBP11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Aox2Q5SGK3 1345 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ttll7A4Q9F0 912 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 1700006A11RikB9EHI3 544 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Tpd52l1O54818 204 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 MyclP10166 368 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Rad17Q6NXW6 688 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Mybbp1aQ7TPV4 1344 aaKnown RBP11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Wdr33Q8K4P0 1330 aaKnown RBP11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Als2Q920R0 1651 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Flt4P35917 1363 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ctdnep1Q3TP92 244 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Rnf20Q5DTM8 973 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Oxsr1Q6P9R2 527 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Dhx38Q80X98 1228 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Nrbp1Q99J45 535 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Sh3bgrQ9WUZ7 214 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kdm6aO70546 1401 aa11.62□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Trim30aP15533 496 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Larp1Q6ZQ58 1072 aaKnown RBP11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Rps6kb1Q8BSK8 525 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Slc39a6Q8C145 765 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 ZwintQ9CQU5 252 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 LratQ9JI60 231 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Tbc1d8Q9Z1A9 1134 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Atp10bB1AWN4 1474 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Nom1Q3UFM5 854 aaKnown RBP11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Adora1Q60612 326 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ppp6r1Q7TSI3 856 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Cep57l1Q8VDS7 400 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Chrna2Q91X60 512 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Arap3Q8R5G7 1538 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 GpkowQ56A08 488 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ano6Q6P9J9 911 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Sh3bp5Q9Z131 463 aa11.61□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Cnnm1Q0GA42 951 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ccdc162pQ0VG85 912 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Lins1Q3U1D0 764 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Nxf2Q4ZGD8 691 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Vps54Q5SPW0 977 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ifit1Q64282 463 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Krt85Q9Z2T6 507 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Abcc12Q80WJ6 1366 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kansl3A2RSY1 903 aaKnown RBP11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Cspp1B2RX88 1205 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 AppP12023 770 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ddx46Q569Z5 1032 aaKnown RBP11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Fbxo2Q80UW2 297 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Nucb2P81117 420 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Cbx1P83917 185 aaKnown RBP11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 TrhQ62361 256 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Zpr1Q62384 459 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Prkab2Q6PAM0 271 aa11.6□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Dixdc1Q80Y83 711 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ano1Q8BHY3 960 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Plcd1Q8R3B1 756 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Taf7Q9R1C0 341 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 TimelessQ9R1X4 1197 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Aox1O54754 1333 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Rbbp8nlA2ABX0 614 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Lekr1B2RVN1 116 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 NmiO35309 314 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 HellsQ60848 821 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 DbnlQ62418 436 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Gimap6Q8K349 305 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kiaa0232Q80U59 1396 aaKnown RBP11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Irgm2A0A140LIF8 407 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Gm973E9Q295 1059 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ercc3P49135 783 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Cfap157Q0VFX2 523 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Q8C5K5 320 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Tmem119Q8R138 280 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 SnrkQ8VDU5 748 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kcnh5Q920E3 988 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Pus3Q9JI38 481 aa11.59□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kiaa0754Q69ZZ9 979 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Kank4Q6P9J5 1016 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Pdia6Q922R8 440 aaKnown RBP11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Pdzd9Q9D9M4 266 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Stat1P42225 749 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Zfp91Q62511 572 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Chmp7Q8R1T1 451 aa11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 StrbpQ91WM1 672 aaKnown RBP11.58□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Oas2E9Q9A9 742 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Hmx1O70218 332 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Frmd3Q8BHD4 595 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nop14Q8R3N1 860 aaKnown RBP11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Lrrfip2Q91WK0 415 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 PigbQ9JJQ0 542 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ncoa4Q5U4H9 625 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ccdc94Q9D6J3 314 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms