RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Zbtb45Q52KG4 520 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ctnnbl1Q9CWL8 563 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 AU019823E9PUQ3 292 aa9.46□□□□□ -0.89
Trub1-201ENSMUST00000026072 Pde4dQ01063 747 aa9.46□□□□□ -0.89
Trub1-201ENSMUST00000026072 Smc1bQ920F6 1248 aa9.46□□□□□ -0.89
Trub1-201ENSMUST00000026072 Brms1Q99N20 246 aa9.46□□□□□ -0.89
Trub1-201ENSMUST00000026072 Speer4dL7N216 212 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Fbln2P37889 1221 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Cacna2d4Q5RJF7 1116 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ccdc12Q8R344 166 aaKnown RBP9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Sil1Q9EPK6 465 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Lrrc9Q8CDN9 1456 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 ScaperF8VQ70 1398 aaKnown RBP9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Kmt5bQ3U8K7 883 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Hspa4Q61316 841 aa9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Bms1Q6PGF5 1284 aaKnown RBP9.46□□□□□ -0.9
Trub1-201ENSMUST00000026072 Grm8P47743 908 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Fam107bQ3TGF2 131 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ppm1eQ80TL0 749 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 RalylQ8BTF8 293 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Gdpd2Q9ESM6 539 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Plekho1Q9JIY0 408 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Plagl1Q9JLQ4 704 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Frmpd2A0A140LI67 1392 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Brd1E9PZ26 1189 aaKnown RBP9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Dapk3O54784 448 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Myl3P09542 204 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Znf697Q569E7 569 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ankrd40Q5SUE8 363 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Abcc6Q9R1S7 1498 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Tsg101Q61187 391 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Gm18336A0A140LIU8 765 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Vamp4O70480 141 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 ArsiQ32KI9 573 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Znf18Q810A1 556 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Cnot6lQ8VEG6 555 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ankrd1Q9CR42 319 aa9.45□□□□□ -0.9
Trub1-201ENSMUST00000026072 AatkQ80YE4 1365 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ccdc112A0AUP1 442 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Eif4a2P10630 407 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Mdm2P23804 489 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Atp2b3Q0VF55 1220 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Traf3ip1Q149C2 625 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ano1Q8BHY3 960 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Mtmr3Q8K296 1196 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Matr3Q8K310 846 aaKnown RBP9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Tmem143Q8VD26 458 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Srgap1Q91Z69 1062 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ccdc83Q9D4V3 305 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Hmg20bQ9Z104 317 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Abca5Q8K448 1642 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Izumo3A6PWV3 263 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Gm10093D3YYI8 482 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Hdac1O09106 482 aaKnown RBP9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ccnl1Q52KE7 532 aaKnown RBP9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ift122Q6NWV3 1182 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Bloc1s4Q8VED2 215 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 GckrQ91X44 587 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Dnajc10Q9DC23 793 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Znf287Q9EQB9 759 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Gapvd1Q6PAR5 1458 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Kifc2O08672 792 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ampd3O08739 766 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Abcf1Q6P542 837 aaKnown RBP9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Cep135Q6P5D4 1140 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Hook3Q8BUK6 718 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Zbtb43Q9DAI4 467 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Cetn2Q9R1K9 172 aa9.44□□□□□ -0.9
Trub1-201ENSMUST00000026072 Usp5P56399 858 aaKnown RBP9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Terf1P70371 421 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Atp8b2P98199 1209 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Nucb1Q02819 459 aaKnown RBP9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Sun3Q5SS91 320 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Gm21985Q6P6P5 1106 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Cyp4f39Q8BGU0 532 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ift74Q8BKE9 600 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Znf428Q8C1M2 176 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 BbxQ8VBW5 907 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Krt23Q99PS0 422 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 WtapQ9ER69 396 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Abtb2Q7TQI7 1024 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ranbp6Q8BIV3 1105 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Slc39a6Q8C145 765 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ccdc73Q8CDM4 1066 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ppp1r3fQ9JIG4 799 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Prpf40aQ9R1C7 953 aaKnown RBP9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Adgrl2Q8JZZ7 1487 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Map2k1P31938 393 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Mcm6P97311 821 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ctdp1Q7TSG2 960 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Sh3d21Q7TSG5 549 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ddx27Q921N6 760 aaKnown RBP9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 Sbno1Q689Z5 1390 aa9.43□□□□□ -0.9
Trub1-201ENSMUST00000026072 LifrP42703 1092 aa9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Fam177a1Q8BR63 207 aa9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Egfem1Q8C088 590 aa9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Ndufa8Q9DCJ5 172 aa9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Rad50P70388 1312 aa9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Mybbp1aQ7TPV4 1344 aaKnown RBP9.42□□□□□ -0.9
Trub1-201ENSMUST00000026072 Abcc2Q8VI47 1543 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms