RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cfap73J3QPZ5 306 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Ptgs1P22437 602 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Ccdc66Q6NS45 935 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 4930504O13RikQ8C5Z9 145 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Slc26a8Q8R0C3 999 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Wnk3Q80XP9 1757 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Ube2hP62257 183 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 TefQ9JLC6 301 aa19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Gpatch11Q3UFS4 262 aa19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Ncbp1Q3UYV9 790 aaKnown RBP19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Polr3gQ6NXY9 223 aa19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Rbm42Q91V81 474 aaKnown RBP19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Mmel1Q9JLI3 765 aa19.6■□□□□ 0.73
Shh-201ENSMUST00000002708 Hvcn1Q3U2S8 269 aa19.59■□□□□ 0.73
Shh-201ENSMUST00000002708 Wdr78E9PYY5 807 aa19.59■□□□□ 0.73
Shh-201ENSMUST00000002708 CgnP59242 1191 aa19.59■□□□□ 0.73
Shh-201ENSMUST00000002708 Sf3a1Q8K4Z5 791 aaKnown RBP19.59■□□□□ 0.73
Shh-201ENSMUST00000002708 Tnks1bp1P58871 1720 aa19.59■□□□□ 0.73
Shh-201ENSMUST00000002708 Brpf3B2KF05 1204 aaKnown RBP19.58■□□□□ 0.73
Shh-201ENSMUST00000002708 Rps6ka5Q8C050 863 aa19.58■□□□□ 0.73
Shh-201ENSMUST00000002708 Ccdc173A0JLY1 547 aa19.58■□□□□ 0.72
Shh-201ENSMUST00000002708 Atf3Q60765 181 aa19.58■□□□□ 0.72
Shh-201ENSMUST00000002708 Asic4Q7TNS7 539 aa19.58■□□□□ 0.72
Shh-201ENSMUST00000002708 Tjp1P39447 1745 aaKnown RBP19.58■□□□□ 0.72
Shh-201ENSMUST00000002708 Ddx11Q6AXC6 880 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Inpp5bQ8K337 993 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 SrrtQ99MR6 875 aaKnown RBP19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Q9D9S1 216 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Kcnf1Q7TSH7 493 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Phlpp1Q8CHE4 1687 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Card10P58660 1021 aa19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Bag3Q9JLV1 577 aaKnown RBP19.57■□□□□ 0.72
Shh-201ENSMUST00000002708 Adora1Q60612 326 aa19.56■□□□□ 0.72
Shh-201ENSMUST00000002708 Tbc1d31Q6NXY1 996 aa19.56■□□□□ 0.72
Shh-201ENSMUST00000002708 Tns2Q8CGB6 1400 aa19.56■□□□□ 0.72
Shh-201ENSMUST00000002708 Med4Q9CQA5 270 aa19.56■□□□□ 0.72
Shh-201ENSMUST00000002708 Rbm8a2A0A0N4SUH6 174 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Fam184aE9PW83 1143 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 NmiO35309 314 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Cnnm3Q32NY4 713 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 GpkowQ56A08 488 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Rbm8aQ9CWZ3 174 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Spata31d1bE9QA57 1361 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 CebpzP53569 1052 aaKnown RBP19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Nom1Q3UFM5 854 aaKnown RBP19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Nlrp9bQ66X22 1003 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Ndufa8Q9DCJ5 172 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Ak2Q9WTP6 239 aa19.55■□□□□ 0.72
Shh-201ENSMUST00000002708 Ugt1a5B2RT14 529 aa19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Zfp91Q62511 572 aa19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Larp1Q6ZQ58 1072 aaKnown RBP19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Nup88Q8CEC0 753 aaKnown RBP19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Nfe2l3Q9WTM4 660 aa19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Neurod6P48986 337 aa19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Pde3bQ61409 1100 aa19.54■□□□□ 0.72
Shh-201ENSMUST00000002708 Kank4Q6P9J5 1016 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Ubr2Q6WKZ8 1755 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 MypnQ5DTJ9 1315 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Nphp3Q7TNH6 1325 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 MecomP14404 1042 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Mdm2P23804 489 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Sgsm2Q80U12 1005 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Polr3dQ91WD1 398 aa19.53■□□□□ 0.72
Shh-201ENSMUST00000002708 Usp25P57080 1055 aa19.52■□□□□ 0.72
Shh-201ENSMUST00000002708 RgmbQ7TQ33 436 aa19.52■□□□□ 0.72
Shh-201ENSMUST00000002708 Dhx38Q80X98 1228 aa19.52■□□□□ 0.72
Shh-201ENSMUST00000002708 Col18a1P39061 1774 aa19.52■□□□□ 0.72
Shh-201ENSMUST00000002708 Grpel1Q99LP6 217 aa19.52■□□□□ 0.72
Shh-201ENSMUST00000002708 Add3Q9QYB5 706 aaKnown RBP19.52■□□□□ 0.71
Shh-201ENSMUST00000002708 Mst1rQ62190 1378 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Zfp142G5E869 1843 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Kcnb2A6H8H5 907 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Lnx1O70263 728 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Ppfia3P60469 1194 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Ripor2Q80U16 1078 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Efcab2Q9CQ46 164 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 Speer4bQ9D9F7 267 aa19.51■□□□□ 0.71
Shh-201ENSMUST00000002708 FocadA2AKG8 1798 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Gm21663A0A0G2JE01 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Gm7361D3Z6R1 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 5031410I06RikE9Q4E0 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Lmod3E9QA62 571 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Gm1979E9QAN3 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Gm5862K7N5V5 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Gm10220K7N660 267 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Esyt1Q3U7R1 1092 aaKnown RBP19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 4930572O03RikQ8C5Y0 211 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Cchcr1Q8K2I2 770 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 InsrrQ9WTL4 1300 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 MsnP26041 577 aaKnown RBP19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Soga3Q6NZL0 945 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Ubxn10Q8BG34 277 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Dhx30Q99PU8 1217 aaKnown RBP19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 LratQ9JI60 231 aa19.5■□□□□ 0.71
Shh-201ENSMUST00000002708 Sp8Q8BMJ8 486 aa19.49■□□□□ 0.71
Shh-201ENSMUST00000002708 Fam13bQ8K2H3 851 aa19.49■□□□□ 0.71
Shh-201ENSMUST00000002708 AceP09470 1312 aa19.49■□□□□ 0.71
Shh-201ENSMUST00000002708 Nxf2Q4ZGD8 691 aa19.49■□□□□ 0.71
Shh-201ENSMUST00000002708 Nrbp1Q99J45 535 aa19.49■□□□□ 0.71
Shh-201ENSMUST00000002708 AppP12023 770 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms