RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PLA2G3Q9NZ20 509 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 LRFN1Q9P244 771 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 EGFL7Q9UHF1 273 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 KCNE5Q9UJ90 142 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF232Q9UNY5 417 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-213ENST00000642137 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 A0A1W2PQD3 144 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 AGAP5A6NIR3 686 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ALG1L2C9J202 215 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ICOSLGO75144 302 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 NEURL1O76050 574 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 PDE5AO76074 875 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 MFN2O95140 757 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OXSR1O95747 527 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 IFNA14P01570 189 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 HPGDP15428 266 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ENDOUP21128 410 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 RPS4Y1P22090 263 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 DCTP40126 519 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ADH7P40394 386 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ST13P50502 369 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ARG2P78540 354 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 MS4A2Q01362 244 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 RHDQ02161 417 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 SNTA1Q13424 505 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OR1C1Q15619 314 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 GRAMD1BQ3KR37 738 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 KLHL26Q53HC5 615 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 RPS26P11Q5JNZ5 115 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ULK2Q8IYT8 1036 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 FAM13CQ8NE31 585 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 BHLHE22Q8NFJ8 381 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OR10G3Q8NGC4 313 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OR52E4Q8NGH9 312 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OR5M3Q8NGP4 307 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 FIG4Q92562 907 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 NTNG2Q96CW9 530 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ASB9Q96DX5 294 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ANGPTL4Q9BY76 406 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ADNPQ9H2P0 1102 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 TIMMDC1Q9NPL8 285 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ANKRD10Q9NXR5 420 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ACTR3BQ9P1U1 418 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 MAGEL2Q9UJ55 1249 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
LINC00339-213ENST00000642137 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
LINC00339-213ENST00000642137 NPIPA5A0A0B4J1W7 369 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 NPIPA7E9PJI5 369 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SCDO00767 359 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
LINC00339-213ENST00000642137 STAMBPO95630 424 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 P04436 131 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 THBS1P07996 1170 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
LINC00339-213ENST00000642137 NPIPA8P0DM63 369 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 IL7RP16871 459 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CNR1P21554 472 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 EVI2BP34910 448 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 PTGDSP41222 190 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CASP3P42574 277 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 KCNJ10P78508 379 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 LARS2Q15031 903 aaKnown RBP11.29□□□□□ -0.6
LINC00339-213ENST00000642137 MAPK14Q16539 360 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SLC25A25Q6KCM7 469 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CBLL1Q75N03 491 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 MDGA2Q7Z553 956 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 MISPQ8IVT2 679 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 POGLUT1Q8NBL1 392 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SLC26A7Q8TE54 656 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CRELD1Q96HD1 420 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SIGLEC12Q96PQ1 595 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 ARHGAP9Q9BRR9 750 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00339-213ENST00000642137 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
LINC00339-213ENST00000642137 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SDHAF3Q9NRP4 125 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 FLRT3Q9NZU0 649 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
LINC00339-213ENST00000642137 PCDHGB6Q9Y5F9 930 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms