RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TMEM19Q96HH6 336 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 BTBD9Q96Q07 612 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 TMEM38AQ9H6F2 299 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 Q9N2J8 555 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 DUSP22Q9NRW4 184 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 OLAHQ9NV23 265 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 GIN1Q9NXP7 522 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 SLC7A8Q9UHI5 535 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 C2orf92A0A1B0GVN3 265 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 GXYLT2A0PJZ3 443 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 TMEM247A6NEH6 219 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 FRG2CA6NGY1 282 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 TTC36A6NLP5 189 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 A8MVJ9 347 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 C5orf58C9J3I9 102 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CXCR6O00574 342 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ARPC2O15144 300 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CIB2O75838 187 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ZFAND5O76080 213 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SERPINA7P05543 415 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CHRM4P08173 479 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CT45A8P0DMV1 189 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CT45A9P0DMV2 189 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 NR2F1P10589 423 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ITGAMP11215 1152 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 NCK1P16333 377 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 HOXB4P17483 251 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 TRHRP34981 398 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PCGF2P35227 344 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PPICP45877 212 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CASP6P55212 293 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 DCAF7P61962 342 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 POU6F2P78424 691 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 HPCAP84074 193 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PSG6Q00889 435 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 RBBP4Q09028 425 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 BNIP2Q12982 314 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SCARB2Q14108 478 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.025e-8■■■□□ 19.2
PHGDH-228ENST00000641847 GPAT3Q53EU6 434 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 CT45A2Q5DJT8 189 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 RPS26P11Q5JNZ5 115 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 DCST2Q5T1A1 773 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 HEPHL1Q6MZM0 1159 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 XKRXQ6PP77 449 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SLC30A8Q8IWU4 369 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 KBTBD2Q8IY47 623 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF441Q8N8Z8 693 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ANKFN1Q8N957 763 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 OR5L2Q8NGL0 311 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 OR8K3Q8NH51 312 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 GPR151Q8TDV0 419 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 THAP3Q8WTV1 239 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SLC38A5Q8WUX1 472 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 FIG4Q92562 907 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ADIPOR1Q96A54 375 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ASB9Q96DX5 294 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 RMND5BQ96G75 393 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SLC35A4Q96G79 324 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 LCORQ96JN0 433 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 BTBD2Q9BX70 525 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 DEFB126Q9BYW3 111 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PCDHAC1Q9H158 963 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 NXF5Q9H1B4 397 aaKnown RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 EXD2Q9NVH0 621 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 LIPT1Q9Y234 373 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 ANGPT4Q9Y264 503 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-228ENST00000641847 OR10H1Q9Y4A9 318 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 PCDHGB3Q9Y5G1 929 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 SNX13Q9Y5W8 968 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 KCNE3Q9Y6H6 103 aa8.65□□□□□ -1.02
PHGDH-228ENST00000641847 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 CCL21O00585 134 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 ACOX3O15254 700 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 STAMBPO95630 424 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AK1P00568 194 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 TFPTP0C1Z6 253 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 ICAM2P13598 275 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 GGT1P19440 569 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 ATP6V1B2P21281 511 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 DRD5P21918 477 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AQP1P29972 269 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 RFX3P48380 749 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 SMSP52788 366 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AP2B1P63010 937 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 MRPS22P82650 360 aaKnown RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 PLCXD2Q0VAA5 305 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 Q0VFX4 171 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 GNA13Q14344 377 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF169Q14929 603 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 MAPK11Q15759 364 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 SYPL1Q16563 259 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms