RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ENPP4Q9Y6X5 453 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NPIPA5A0A0B4J1W7 369 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NPIPA7E9PJI5 369 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 POLR1CO15160 346 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 MPZL2O60487 215 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 FCMRO60667 390 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 BCAS1O75363 584 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 STX11O75558 287 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GADD45GO95257 159 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 TIAF1O95411 115 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 AK1P00568 194 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GP1BAP07359 652 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 HEXBP07686 556 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF806P0C7X5 589 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NPIPA8P0DM63 369 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 RHCEP18577 417 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 AGXTP21549 392 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 SOX18P35713 384 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GGT2P36268 569 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GCGRP47871 477 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ST13P50502 369 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 DCDP81605 110 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 RHAGQ02094 409 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 EMX1Q04741 257 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 DUSP8Q13202 625 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF846Q147U1 533 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 LARS2Q15031 903 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NSDHLQ15738 373 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NNATQ16517 81 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NKAIN1Q4KMZ8 207 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ANKRD34AQ69YU3 496 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 TYW3Q6IPR3 259 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 HEPHL1Q6MZM0 1159 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 FRRS1Q6ZNA5 592 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GALNT5Q7Z7M9 940 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NAXDQ8IW45 347 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF619Q8N2I2 560 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF614Q8N883 585 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 C9orf43Q8TAL5 461 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GIPC3Q8TF64 312 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 CHPT1Q8WUD6 406 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 CTHRC1Q96CG8 243 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 PLEKHA8Q96JA3 519 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 SDF2Q99470 211 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 BARD1Q99728 777 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 DCUN1D5Q9BTE7 237 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 RACGAP1Q9H0H5 632 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 SLC38A1Q9H2H9 487 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 RIBC2Q9H4K1 309 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 MTHFD2LQ9H903 347 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 HMG20AQ9NP66 347 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 DUSP22Q9NRW4 184 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 SIDT1Q9NXL6 827 aaKnown RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 KLHL28Q9NXS3 571 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 SLC39A1Q9NY26 324 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 NCDNQ9UBB6 729 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 CTSFQ9UBX1 484 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 PRODH2Q9UF12 536 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 GPN3Q9UHW5 284 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 KCND3Q9UK17 655 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 TMCC3Q9ULS5 477 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF443Q9Y2A4 671 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-219ENST00000641513 OR10H1Q9Y4A9 318 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 PCDHGA10Q9Y5H3 936 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 LYVE1Q9Y5Y7 322 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 TTC28Q96AY4 2481 aa8.22□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF318Q5VUA4 2279 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 SH3D21A4FU49 640 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 PRAMEF25A6NGN4 478 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 PRR33A8MZF0 331 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 CLDN25C9JDP6 229 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 CPNE3O75131 537 aaKnown RBP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 SOX30O94993 753 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 NKX2-2O95096 273 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 DBIP07108 87 aaKnown RBP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 ZGLP1P0C6A0 271 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 CCNYL3P0C7X3 344 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 FGF5P12034 268 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 CCL4P13236 92 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 CD59P13987 128 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 S1PR1P21453 382 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 GALNSP34059 522 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 RORAP35398 523 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 UGT2B10P36537 528 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 LIMS1P48059 325 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 EMDP50402 254 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 NUBP1P53384 320 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 TUBA1BP68363 451 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 ZFP36L1Q07352 338 aaKnown RBP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 IL11RAQ14626 422 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 PUM1Q14671 1186 aaKnown RBP eCLIP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 ELAVL1Q15717 326 aaKnown RBP8.21□□□□□ -1.1
PHGDH-219ENST00000641513 NPTX1Q15818 432 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 EXOC3L2Q2M3D2 409 aa8.21□□□□□ -1.1
PHGDH-219ENST00000641513 HLA-DQA1Q5Y7H0 255 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms