RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SERPINE1P05121 402 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 TUBBP07437 444 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 ALOX5P09917 674 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 POU3F2P20265 443 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-232ENST00000640653 MAD2L1Q13257 205 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-232ENST00000640653 KIF18BQ86Y91 864 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 GRAMD2AQ8IUY3 354 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 MEIOBQ8N635 442 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 SLC16A11Q8NCK7 471 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 FAM120BQ96EK7 910 aaKnown RBP22.81■■□□□ 1.24
VEGFA-232ENST00000640653 C1GALT1C1Q96EU7 318 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 PIGQQ9BRB3 760 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 CENPHQ9H3R5 247 aa22.81■■□□□ 1.24
VEGFA-232ENST00000640653 SIRT3Q9NTG7 399 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-232ENST00000640653 KIAA1549Q9HCM3 1950 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 IGLV3-32A0A0A0MS00 114 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 WDR91A4D1P6 747 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 NGFRP08138 427 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 LAMP1P11279 417 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 PRPS1L1P21108 318 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 LCN1P31025 176 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 EEFSECP57772 596 aaKnown RBP22.8■■□□□ 1.24
VEGFA-232ENST00000640653 EEF1A1P68104 462 aaKnown RBP22.8■■□□□ 1.24
VEGFA-232ENST00000640653 SNTB1Q13884 538 aaKnown RBP22.8■■□□□ 1.24
VEGFA-232ENST00000640653 CHI3L2Q15782 390 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 DUSP5Q16690 384 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.8■■□□□ 1.24
VEGFA-232ENST00000640653 GLYR1Q49A26 553 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-232ENST00000640653 EEF1A1P5Q5VTE0 462 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 COX18Q8N8Q8 333 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 OR5P2Q8WZ92 322 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 JADE3Q92613 823 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 ZIM3Q96PE6 472 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 CRIM1Q9NZV1 1036 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 SNX8Q9Y5X2 465 aa22.8■■□□□ 1.24
VEGFA-232ENST00000640653 ALG1L2C9J202 215 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 HCRTR2O43614 444 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 KCNK2O95069 426 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 SNUPNO95149 360 aaKnown RBP22.79■■□□□ 1.24
VEGFA-232ENST00000640653 ABCE1P61221 599 aaKnown RBP22.79■■□□□ 1.24
VEGFA-232ENST00000640653 FOXF2Q12947 444 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 LSM12Q3MHD2 195 aaKnown RBP22.79■■□□□ 1.24
VEGFA-232ENST00000640653 FLYWCH1Q4VC44 716 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 CEP85LQ5SZL2 805 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 FIGNL1Q6PIW4 674 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 APOOLQ6UXV4 268 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 P4HA3Q7Z4N8 544 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 GALNT10Q86SR1 603 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 CROCCP2Q86T23 111 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 UBQLNLQ8IYU4 475 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 FAM110BQ8TC76 370 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 FAM222BQ8WU58 562 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 INTS12Q96CB8 462 aaKnown RBP22.79■■□□□ 1.24
VEGFA-232ENST00000640653 CHMP6Q96FZ7 201 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 C16orf58Q96GQ5 468 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 YIPF4Q9BSR8 244 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 JKAMPQ9P055 326 aa22.79■■□□□ 1.24
VEGFA-232ENST00000640653 NDUFB5O43674 189 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 ITM2AO43736 263 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 OXSR1O95747 527 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-232ENST00000640653 HMGN2P05204 90 aaKnown RBP22.78■■□□□ 1.24
VEGFA-232ENST00000640653 TBXA2RP21731 343 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 DIO3P55073 304 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 COQ8BQ96D53 544 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 STACQ99469 402 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 BTBD2Q9BX70 525 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 BHLHE41Q9C0J9 482 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-232ENST00000640653 PIGMQ9H3S5 423 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 DUSP22Q9NRW4 184 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 NOP53Q9NZM5 478 aaKnown RBP22.78■■□□□ 1.24
VEGFA-232ENST00000640653 ZNF337Q9Y3M9 751 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 ACTL7BQ9Y614 415 aa22.78■■□□□ 1.24
VEGFA-232ENST00000640653 OR2M5A3KFT3 312 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 MYZAPP0CAP1 466 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 HPGDP15428 266 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 POU6F2P78424 691 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 SORDQ00796 357 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 EMX2Q04743 252 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 LASP1Q14847 261 aaKnown RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 PDCD2Q16342 344 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 SMU1Q2TAY7 513 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 SPDYE7PQ495Y7 208 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 EXOSC6Q5RKV6 272 aaKnown RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 OR2A2Q6IF42 318 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 PLXDC2Q6UX71 529 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 KIRREL3Q8IZU9 778 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 GCNT2Q8N0V5 402 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 KRTCAP2Q8N6L1 136 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 ZNF781Q8N8C0 355 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 OR56A1Q8NGH5 318 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 OR4C3Q8NH37 302 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 PSMA8Q8TAA3 256 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 NEUROD4Q9HD90 331 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 UBQLN4Q9NRR5 601 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 GIN1Q9NXP7 522 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 DNAJB12Q9NXW2 375 aaKnown RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 ASIC5Q9NY37 505 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-232ENST00000640653 RAP2CQ9Y3L5 183 aa22.77■■□□□ 1.24
VEGFA-232ENST00000640653 OTOGQ6ZRI0 2925 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms