RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FAM111BQ6SJ93 734 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CYHR1Q6ZMK1 362 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LIMS2Q7Z4I7 341 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SDR9C7Q8NEX9 313 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SGCDQ92629 289 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 BPIFA2Q96DR5 249 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 HRASLS5Q96KN8 279 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 OR5M11Q96RB7 305 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF559Q9BR84 538 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 MS4A8Q9BY19 250 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 WDR37Q9Y2I8 494 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 FAM221BA6H8Z2 402 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 OR14I1A6ND48 311 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 RAD1O60671 282 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PSMA6P60900 246 aaKnown RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 ENTHD1Q8IYW4 607 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 MMP21Q8N119 569 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SYT14Q8NB59 555 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 CCDC107Q8WV48 283 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 FAM3CQ92520 227 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SHDQ96IW2 340 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 AK6Q9Y3D8 172 aaKnown RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PLEKHM1Q9Y4G2 1056 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 TRAV27A0A087WT01 109 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 A0A0X1KG70 313 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 WRBO00258 174 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 NR4A2P43354 598 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 MAN2A2P49641 1150 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SHISA6Q6ZSJ9 500 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SETD6Q8TBK2 473 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 C15orf40Q8WUR7 153 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 FCAMRQ8WWV6 532 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 CENPOQ9BU64 300 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 CCDC32Q9BV29 185 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SLC6A17Q9H1V8 727 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 CHMP1AQ9HD42 196 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 CNOT2Q9NZN8 540 aaKnown RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PLCL2Q9UPR0 1127 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 TSPAN4O14817 238 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 NPC1O15118 1278 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SLC16A6O15403 523 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF41P51814 821 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 ISL1P61371 349 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 GPR19Q15760 415 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 PUS10Q3MIT2 529 aaKnown RBP13.55□□□□□ -0.24
SCARB2-216ENST00000639300 OR9A4Q8NGU2 314 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM234Q8WY98 164 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 IL21Q9HBE4 155 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 IL37Q9NZH6 218 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 SH2B3Q9UQQ2 575 aa13.55□□□□□ -0.24
SCARB2-216ENST00000639300 C13orf42A0A1B0GVH6 325 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF878C9JN71 531 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 GFYI3L273 518 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 TSPAN9O75954 239 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 IFNA7P01567 189 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 RABIFP47224 123 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 HES5Q5TA89 166 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 PNLDC1Q8NA58 520 aaKnown RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 C1QTNF3Q9BXJ4 246 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 GLIPR2Q9H4G4 154 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 FBXL3Q9UKT7 428 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ATG4BQ9Y4P1 393 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 A0A1B0GVI7 797 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 SLC5A10A0PJK1 596 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 GSTT2P0CG29 244 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 F3P13726 295 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 FXYD6P3P58550 94 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 NKX3-2P78367 333 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 LRRC37A5PQ49AS3 106 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 RBM45Q8IUH3 476 aaKnown RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM151BQ8IW70 566 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.246e-6■■□□□ 12.3
SCARB2-216ENST00000639300 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 TIMM29Q9BSF4 260 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 CPNE7Q9UBL6 633 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 PSORS1C1Q9UIG5 152 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 KIAA1217Q5T5P2 1943 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 POLR1CO15160 346 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 BMP4P12644 408 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 GTF2F2P13984 249 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 NR0B1P51843 470 aaKnown RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF765Q7L2R6 523 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 SYNPOQ8N3V7 929 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 OR6T1Q8NGN1 323 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 DEFB126Q9BYW3 111 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 PTGES2Q9H7Z7 377 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 A0A1W2PPL8 197 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 H0YGG7 62 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 PLPP1O14494 284 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms