RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 C3orf30Q96M34 536 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 TSPAN10Q9H1Z9 355 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 OR51E2Q9H255 320 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 RIMS3Q9UJD0 308 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 TRAPPC6AO75865 159 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 IL33O95760 270 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 CDK4P11802 303 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 M6PRP20645 277 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 PRSS3P35030 304 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 POU3F4P49335 361 aa16.3■□□□□ 0.2
HNRNPU-217ENST00000638952 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TGM4P49221 684 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 AGAP6Q5VW22 663 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 DEFB119Q8N690 84 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 AGAP4Q96P64 663 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 THAP7Q9BT49 309 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF416Q9BWM5 594 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 NTN4Q9HB63 628 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 PRTFDC1Q9NRG1 225 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 RLIMQ9NVW2 624 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 CSTAP01040 98 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 CD70P32970 193 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SPINT3P49223 89 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 GPR19Q15760 415 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 NNATQ16517 81 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 DEFB134Q4QY38 66 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 AWAT2Q6E213 333 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 CCDC71LQ8N9Z2 235 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 C20orf27Q9GZN8 174 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TMPRSS11EQ9UL52 423 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TCRBV3S1A0A5B6 114 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 OSMP13725 252 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 INHBCP55103 352 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 CRYZQ08257 329 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 APOFQ13790 326 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 MLC1Q15049 377 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SLC22A25Q6T423 547 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.21e-8■■□□□ 12.8
HNRNPU-217ENST00000638952 COMMD6Q7Z4G1 85 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 G6PC3Q9BUM1 346 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SLC12A9Q9BXP2 914 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 C4BP0C0L5 1744 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 CLN5O75503 358 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 SCGB2A1O75556 95 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 ARAFP10398 606 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TAS2R31P59538 309 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 RPS27AP62979 156 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 UBA52P62987 128 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 KCNIP4Q6PIL6 250 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF695Q8IW36 515 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 COPS3Q9UNS2 423 aa16.29■□□□□ 0.2
HNRNPU-217ENST00000638952 TTLL8A6PVC2 850 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 VEGFDO43915 354 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MAP4K2Q12851 820 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 GAS2L1Q99501 681 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 SMIM3Q9BZL3 60 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 DNTTIP1Q9H147 329 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 DKKL1Q9UK85 242 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF623O75123 536 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ARHGEF15O94989 841 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 DRD2P14416 443 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 TAS2R38P59533 333 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 FAM69AQ5T7M9 428 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MANEALQ5VSG8 457 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 TMEM225Q6GV28 225 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF551Q7Z340 670 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MMABQ96EY8 250 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 VAPAQ9P0L0 249 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 IL20RAQ9UHF4 553 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 COL2A1P02458 1487 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ARGFXA6NJG6 315 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF701M0R085 212 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 PPP6CO00743 305 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 RAB3DO95716 219 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 HOXC8P31273 242 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 HTRA4P83105 476 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 PLBD1Q6P4A8 553 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 SCD5Q86SK9 330 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 DCP2Q8IU60 420 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 DPH7Q9BTV6 452 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 C5AR2Q9P296 337 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 B3GNT3Q9Y2A9 372 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 MYH1P12882 1939 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 UNCXA6NJT0 531 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 CSF1P09603 554 aa16.28■□□□□ 0.2
HNRNPU-217ENST00000638952 GAAP10253 952 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms