RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KCNH1O95259 989 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 ANGPTL1O95841 491 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 SERPINE1P05121 402 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 TMIGD3P0DMS9 266 aaPredicted RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 MAPK1P28482 360 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 GCKP35557 465 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 ASCL1P50553 236 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 SUCLG1P53597 346 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 DSCR4P56555 118 aaPredicted RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 CLDN15P56746 228 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 ABCE1P61221 599 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 LASP1Q14847 261 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 EXOSC6Q5RKV6 272 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 AAGABQ6PD74 315 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 R3HCC1LQ7Z5L2 792 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 TMEM200AQ86VY9 491 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 CLEC4FQ8N1N0 589 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 CDRT4Q8N9R6 151 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 CDS1Q92903 461 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 INTS12Q96CB8 462 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 MTERF3Q96E29 417 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 CALHM2Q9HA72 323 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 CRIM1Q9NZV1 1036 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 F8P00451 2351 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 NPIPA5A0A0B4J1W7 369 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 NPIPA7E9PJI5 369 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 OXSR1O95747 527 aaPredicted RBP16.02■□□□□ 0.16
PNKP-230ENST00000638016 TGM6O95932 706 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 HMGN2P05204 90 aaKnown RBP16.02■□□□□ 0.16
PNKP-230ENST00000638016 NPIPA8P0DM63 369 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 CTSSP25774 331 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 RIMKLAQ8IXN7 391 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 ANKRD42Q8N9B4 389 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 OR5AK3PQ8NH89 298 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 C1GALT1C1Q96EU7 318 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 TBL1XR1Q9BZK7 514 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 C3orf14Q9HBI5 128 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 KCNK9Q9NPC2 374 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 GIN1Q9NXP7 522 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 ZNF629Q9UEG4 869 aaPredicted RBP16.02■□□□□ 0.16
PNKP-230ENST00000638016 KCNN3Q9UGI6 736 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 MRPS18CQ9Y3D5 142 aaKnown RBP16.02■□□□□ 0.16
PNKP-230ENST00000638016 ZNF337Q9Y3M9 751 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 KCNE3Q9Y6H6 103 aa16.02■□□□□ 0.16
PNKP-230ENST00000638016 OR2M5A3KFT3 312 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 H3BML4 177 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 SYT5O00445 386 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 SEC14L5O43304 696 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 ALOX5P09917 674 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 POU3F2P20265 443 aaPredicted RBP16.01■□□□□ 0.15
PNKP-230ENST00000638016 CHMP24386 653 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
PNKP-230ENST00000638016 DIO3P55073 304 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 CLDN20P56880 219 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 PRR5P85299 388 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 TP53BP2Q13625 1128 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 MLC1Q15049 377 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 CPTPQ5TA50 214 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 CDH24Q86UP0 819 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 CLECL1Q8IZS7 167 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 COX18Q8N8Q8 333 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 FAM110BQ8TC76 370 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 SMPDL3BQ92485 455 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 RNASE6Q93091 150 aaKnown RBP16.01■□□□□ 0.15
PNKP-230ENST00000638016 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 CHMP6Q96FZ7 201 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 AKTIPQ9H8T0 292 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 SSU72Q9NP77 194 aaKnown RBP16.01■□□□□ 0.15
PNKP-230ENST00000638016 MRTO4Q9UKD2 239 aaKnown RBP16.01■□□□□ 0.15
PNKP-230ENST00000638016 VDAC3Q9Y277 283 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 ABCA4P78363 2273 aa16.01■□□□□ 0.15
PNKP-230ENST00000638016 TM9SF1O15321 606 aa16■□□□□ 0.15
PNKP-230ENST00000638016 BIRC5O15392 142 aa16■□□□□ 0.15
PNKP-230ENST00000638016 HCRTR2O43614 444 aa16■□□□□ 0.15
PNKP-230ENST00000638016 SLC1A6P48664 564 aa16■□□□□ 0.15
PNKP-230ENST00000638016 RPS26P62854 115 aaKnown RBP16■□□□□ 0.15
PNKP-230ENST00000638016 CD226Q15762 336 aa16■□□□□ 0.15
PNKP-230ENST00000638016 VPS26BQ4G0F5 336 aa16■□□□□ 0.15
PNKP-230ENST00000638016 LUZP2Q86TE4 346 aa16■□□□□ 0.15
PNKP-230ENST00000638016 GRAMD2AQ8IUY3 354 aa16■□□□□ 0.15
PNKP-230ENST00000638016 OR5P2Q8WZ92 322 aa16■□□□□ 0.15
PNKP-230ENST00000638016 FIG4Q92562 907 aa16■□□□□ 0.15
PNKP-230ENST00000638016 SH3YL1Q96HL8 342 aaPredicted RBP16■□□□□ 0.15
PNKP-230ENST00000638016 ZNF845Q96IR2 970 aaPredicted RBP16■□□□□ 0.15
PNKP-230ENST00000638016 PAIP2Q9BPZ3 127 aaKnown RBP16■□□□□ 0.15
PNKP-230ENST00000638016 NUF2Q9BZD4 464 aa16■□□□□ 0.15
PNKP-230ENST00000638016 SDHAF3Q9NRP4 125 aa16■□□□□ 0.15
PNKP-230ENST00000638016 PNPOQ9NVS9 261 aa16■□□□□ 0.15
PNKP-230ENST00000638016 GPATCH2Q9NW75 528 aa16■□□□□ 0.15
PNKP-230ENST00000638016 RAP2CQ9Y3L5 183 aa16■□□□□ 0.15
PNKP-230ENST00000638016 IGLV3-32A0A0A0MS00 114 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 TTC36A6NLP5 189 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 ALG1L2C9J202 215 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 OIP5O43482 229 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 RCBTB2O95199 551 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 OPN1LWP04000 364 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 SOAT1P35610 550 aa15.99■□□□□ 0.15
PNKP-230ENST00000638016 KIR2DL3P43628 341 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms