RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-255	ENST00000637966	PTRH2	Q9Y3E5	179 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-255	ENST00000637966	LYVE1	Q9Y5Y7	322 aa		11.42	□□□□□ -0.58
CACNA1A-255	ENST00000637966	NIN	Q8N4C6	2090 aa		11.42	□□□□□ -0.58
CACNA1A-255	ENST00000637966	SAGE2P	A6NJ88	616 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	LGI1	O95970	557 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	UMOD	P07911	640 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ITGA2	P17301	1181 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	FUT4	P22083	530 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	IGFBP5	P24593	272 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ELK4	P28324	431 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	KCNC4	Q03721	635 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	CTU2	Q2VPK5	515 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	RFX4	Q33E94	735 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	FAM69B	Q5VUD6	431 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TTC23	Q5W5X9	447 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TMPRSS12	Q86WS5	348 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	VRK2	Q86Y07	508 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PEX5L	Q8IYB4	626 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	B3GNT7	Q8NFL0	401 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	OR2Y1	Q8NGV0	311 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	FBLIM1	Q8WUP2	373 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ADIPOR1	Q96A54	375 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ZNF300	Q96RE9	604 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	LPAR4	Q99677	370 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	WDR77	Q9BQA1	342 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	REEP1	Q9H902	201 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TUBA8	Q9NY65	449 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PDP1	Q9P0J1	537 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	FOXJ2	Q9P0K8	574 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	CBLC	Q9ULV8	474 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PPIE	Q9UNP9	301 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	IFT52	Q9Y366	437 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	OR10H1	Q9Y4A9	318 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	CUL9	Q8IWT3	2517 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	SPEG	Q15772	3267 aa		11.41	□□□□□ -0.58
CACNA1A-255	ENST00000637966	C2orf92	A0A1B0GVN3	265 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	AGAP5	A6NIR3	686 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	OR6C76	A6NM76	312 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PRKN	O60260	465 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TNFSF15	O95150	251 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	EPPIN	O95925	133 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	IGKV1D-16	P01601	117 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	IFNW1	P05000	195 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PRKAR1B	P31321	381 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	RRM2	P31350	389 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	YAP1	P46937	504 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	DCAF7	P61962	342 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	NNAT	Q16517	81 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ZNF691	Q5VV52	312 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	HLA-DQA1	Q5Y7H0	255 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PAPD4	Q6PIY7	484 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	DHRS4L2	Q6PKH6	230 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	SLC29A4	Q7RTT9	530 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	THAP5	Q7Z6K1	395 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	GALNT5	Q7Z7M9	940 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ZNF605	Q86T29	641 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	COMTD1	Q86VU5	262 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	C9orf40	Q8IXQ3	194 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	BCORP1	Q8N888	145 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	PIK3C3	Q8NEB9	887 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ADAMTS16	Q8TE57	1224 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	TMIGD2	Q96BF3	282 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	C8orf44	Q96CB5	159 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	LCOR	Q96JN0	433 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ZNF347	Q96SE7	839 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	G6PC3	Q9BUM1	346 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	SEMA4C	Q9C0C4	833 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	B3GNT4	Q9C0J1	378 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	NXF5	Q9H1B4	397 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	CACYBP	Q9HB71	228 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	NDUFA13	Q9P0J0	144 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966	ENPP4	Q9Y6X5	453 aa		11.4	□□□□□ -0.58
CACNA1A-255	ENST00000637966		A0A087WXM4	84 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	LOC102723996	A0A087X1L8	192 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	LOC100130705	A0A1B0GUX0	176 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	FRG2C	A6NGY1	282 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	SYT5	O00445	386 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	DLL1	O00548	723 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	KIAA0513	O60268	411 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	RAB40AL	P0C0E4	278 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	IL7R	P16871	459 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	TCN2	P20062	427 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	RPS4Y1	P22090	263 aa	Known RBP	11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	LIMS1	P48059	325 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	RFX3	P48380	749 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	RAD23A	P54725	363 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	NHLH1	Q02575	133 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	CD47	Q08722	323 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	LARS2	Q15031	903 aa	Known RBP	11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	EBP	Q15125	230 aa	Known RBP	11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	MAPK14	Q16539	360 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	BORA	Q6PGQ7	559 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	ZAR1	Q86SH2	424 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	AMER2	Q8N7J2	671 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	APCDD1L	Q8NCL9	501 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	ZNF555	Q8NEP9	628 aa		11.4	□□□□□ -0.59
CACNA1A-255	ENST00000637966	OR4D11	Q8NGI4	311 aa		11.4	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms