RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 LIPKQ5VXJ0 399 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 DGAT2L6Q6ZPD8 337 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 CDRT4Q8N9R6 151 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 C1GALT1C1Q96EU7 318 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 C10orf90Q96M02 699 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 IFT27Q9BW83 186 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 GABARAPL3Q9BY60 117 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 SAP130Q9H0E3 1048 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 ATP13A2Q9NQ11 1180 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 TMEM9Q9P0T7 183 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 ENPP5Q9UJA9 477 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 POMT2Q9UKY4 750 aa9.02□□□□□ -0.97
CACNA1A-248ENST00000637774 EFCAB10A6NFE3 127 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 BCAT2O15382 392 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CLPXO76031 633 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CSF2P04141 144 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 S100A5P33763 92 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 FRKP42685 505 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 GCGRP47871 477 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 MAN2A2P49641 1150 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 GTF2IRD2BQ6EKJ0 949 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ZNF836Q6ZNA1 936 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 FRRS1Q6ZNA5 592 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 GTF2IRD2Q86UP8 949 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SLC15A4Q8N697 577 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CYB561A3Q8NBI2 242 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 OR52L1Q8NGH7 329 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 OR8J1Q8NGP2 316 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 OR51Q1Q8NH59 317 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 TANKQ92844 425 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 KCNS3Q9BQ31 491 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ABCB10Q9NRK6 738 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CNOT1A5YKK6 2376 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 GTPBP1O00178 669 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 REM1O75628 298 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ADORA3P0DMS8 318 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 RPL4P36578 427 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 OPRL1P41146 370 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PI4KAP42356 2102 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PCYT1AP49585 367 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CSNK2BP67870 215 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 MLC1Q15049 377 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 HLA-DQA1Q5Y7H0 255 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 RNF44Q7L0R7 432 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 RCBTB1Q8NDN9 531 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 NT5CQ8TCD5 201 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CNOT9Q92600 299 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ZDHHC12Q96GR4 267 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 DHRS1Q96LJ7 313 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 NUAK2Q9H093 628 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ATXN7L1Q9ULK2 861 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 IFT52Q9Y366 437 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SIT1Q9Y3P8 196 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 RPL36Q9Y3U8 105 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SPIN1Q9Y657 262 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SLC35F4A4IF30 521 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SHISA7A6NL88 538 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 DYRK3O43781 588 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 MPZL2O60487 215 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 AGR2O95994 175 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PCMT1P22061 227 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CBX3Q13185 183 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 GDF7Q7Z4P5 450 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 SDR16C5Q8N3Y7 309 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 OR51L1Q8NGJ5 315 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 FLVCR1-AS1Q8TAF5 88 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 DEPDC7Q96QD5 511 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 CDX2Q99626 313 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PITX2Q99697 317 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PIGUQ9H490 435 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 Q9N2J8 555 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 ZNF229Q9UJW7 825 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 PILRAQ9UKJ1 303 aa9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 C19orf53Q9UNZ5 99 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-248ENST00000637774 TRAV27A0A087WT01 109 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 A0A1W2PRQ8 180 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 PRR19A6NJB7 356 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 ZAR1LA6NP61 321 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 SOX1O00570 391 aaPredicted RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 SLC2A10O95528 541 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 OXSR1O95747 527 aaPredicted RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 RPLP0P05388 317 aaKnown RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 MRPL3P09001 348 aaKnown RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 NME1P15531 152 aaKnown RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 CAPZBP47756 277 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 CDH11P55287 796 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 RAB38P57729 211 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 ZNF91Q05481 1191 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 ILKQ13418 452 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 SMAD2Q15796 467 aaKnown RBP9□□□□□ -0.97
CACNA1A-248ENST00000637774 INAQ16352 499 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 GXYLT1Q4G148 440 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 VWA2Q5GFL6 755 aa9□□□□□ -0.97
CACNA1A-248ENST00000637774 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms