RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 FADS6Q8N9I5 356 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 ACBD4Q8NC06 268 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 SLC16A11Q8NCK7 471 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 NAXEQ8NCW5 288 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 OR56A1Q8NGH5 318 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 MGARPQ8TDB4 240 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 HOXB13Q92826 284 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 SORT1Q99523 831 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 TUBA1CQ9BQE3 449 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 DUSP26Q9BV47 211 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 BHLHE41Q9C0J9 482 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 C20orf27Q9GZN8 174 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 HHATLQ9HCP6 504 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 SIRT3Q9NTG7 399 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
PNKP-228ENST00000637325 ANKHD1Q8IWZ3 2542 aaKnown RBP12.52□□□□□ -0.41
PNKP-228ENST00000637325 TMEM120BA0PK00 339 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 NDUFB5O43674 189 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 GMFGO60234 142 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 KCNK2O95069 426 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 KRT16P08779 473 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 PEPDP12955 493 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 IGFBP2P18065 325 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 POU3F2P20265 443 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 CTSSP25774 331 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 UQCRC1P31930 480 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 SOAT1P35610 550 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 LHX2P50458 406 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 POU6F2P78424 691 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 BST1Q10588 318 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 MYBPHQ13203 477 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 TP53BP2Q13625 1128 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 ADAMTS15Q8TE58 950 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 C1GALT1C1Q96EU7 318 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 LURAP1Q96LR2 239 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 STACQ99469 402 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 TREX2Q9BQ50 279 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 G6PC3Q9BUM1 346 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 BTBD2Q9BX70 525 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 ACTRT3Q9BYD9 372 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 RTN4RQ9BZR6 473 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 DPY30Q9C005 99 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 NKIRAS1Q9NYS0 192 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
PNKP-228ENST00000637325 PCDHGB4Q9UN71 923 aa12.51□□□□□ -0.41
PNKP-228ENST00000637325 POLQO75417 2590 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 CLCA1A8K7I4 914 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 SCDO00767 359 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 OXSR1O95747 527 aaPredicted RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 LBPP18428 481 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 ATP6V1C1P21283 382 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 LCN1P31025 176 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 OPRM1P35372 400 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 ASCL1P50553 236 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 AGFG1P52594 562 aaKnown RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 ZNF136P52737 540 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 EEFSECP57772 596 aaKnown RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 MAGOHP61326 146 aaKnown RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.5□□□□□ -0.41
PNKP-228ENST00000637325 CCNJQ5T5M9 372 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 BHLHB9Q6PI77 547 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 P4HA3Q7Z4N8 544 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 MEIOBQ8N635 442 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 C9orf106Q8NAJ2 232 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 GATSQ8NAP1 163 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 OR5M1Q8NGP8 315 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 GOT1L1Q8NHS2 421 aaPredicted RBP12.5□□□□□ -0.41
PNKP-228ENST00000637325 FAM110BQ8TC76 370 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 CDS1Q92903 461 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 PIGQQ9BRB3 760 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 PIGUQ9H490 435 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 CXorf36Q9H7Y0 433 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms