RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 STARD6P59095 220 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TGM3Q08188 693 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 LASP1Q14847 261 aaKnown RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 REEP3Q6NUK4 255 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ZNF544Q6NX49 715 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 PM20D2Q8IYS1 436 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RASSF5Q8WWW0 418 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RERGQ96A58 199 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 TM4SF19Q96DZ7 209 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 C16orf58Q96GQ5 468 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 BEX2Q9BXY8 128 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 EHD3Q9NZN3 535 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 KIF17Q9P2E2 1029 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RHCGQ9UBD6 479 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 WNT16Q9UBV4 365 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CLDN24A6NM45 220 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CENPXA8MT69 81 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 SLC28A2O43868 658 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 ADAM11O75078 769 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 ST6GAL1P15907 406 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 BCKDHBP21953 392 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CPN2P22792 545 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 DNAJA1P31689 397 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 CAPZA2P47755 286 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 OR3A3P47888 321 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 GANABQ14697 944 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 TBRG1Q3YBR2 411 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 IFI44LQ53G44 452 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 OR5T3Q8NGG3 340 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 BAHD1Q8TBE0 780 aaPredicted RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 SLC35G5Q96KT7 338 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 RIBC2Q9H4K1 309 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 ERVMER34-1Q9H9K5 563 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 LIN7BQ9HAP6 207 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 RANGRFQ9HD47 186 aaPredicted RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 ERVK13-1Q9NX77 482 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 TLR4O00206 839 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 HMGN2P05204 90 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 CSNK2A2P19784 350 aaPredicted RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 IGFBP5P24593 272 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 MC3RP41968 323 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 GSTM5P46439 218 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CRISP3P54108 245 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 PCBP3P57721 371 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 PRKCDQ05655 676 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 DEFB133Q30KQ1 61 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CRB2Q5IJ48 1285 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 ARMC6Q6NXE6 501 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 ATG16L2Q8NAA4 619 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 NT5CQ8TCD5 201 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 POP5Q969H6 163 aaKnown RBP10.77□□□□□ -0.69
CLN6-217ENST00000636964 SHDQ96IW2 340 aa10.77□□□□□ -0.69
CLN6-217ENST00000636964 A0A0B4J293 547 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 A0A0J9YY10 115 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 A0A1W2PR77 199 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 OR5K3A6NET4 321 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ZNF98A6NK75 572 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 C12orf71A8MTZ7 269 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 TMEM127O75204 238 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CSF2P04141 144 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 NR2F6P10588 404 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 FPR1P21462 350 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CDH12P55289 794 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ITGA1P56199 1179 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 DOC2BQ14184 412 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 PLBD1Q6P4A8 553 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 OOSP2Q86WS3 158 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 LHFPL5Q8TAF8 219 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 KLHL6Q8WZ60 621 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 RNF31Q96EP0 1072 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CCDC120Q96HB5 630 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 HS6ST2Q96MM7 605 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 KCNE3Q9Y6H6 103 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ZNF780BQ9Y6R6 833 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 AGRPO00253 132 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 SCO1O75880 301 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 VAMP1P23763 118 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 UGT2B10P36537 528 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 LIM2P55344 173 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 DMWDQ09019 674 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ARHGAP11AQ6P4F7 1023 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ARL14Q8N4G2 192 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CAMKVQ8NCB2 501 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 KCMF1Q9P0J7 381 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 C3orf18Q9UK00 162 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CLEC4AQ9UMR7 237 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ENTPD2Q9Y5L3 495 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CCDC163A0A0D9SF12 145 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 FAM227AF5H4B4 570 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 WBP4O75554 376 aaKnown RBP10.76□□□□□ -0.69
CLN6-217ENST00000636964 NR2F1P10589 423 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 MPIP34949 423 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms