RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SYPP08247 313 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 PEPDP12955 493 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ELK1P19419 428 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 MPIP34949 423 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 DDOSTP39656 456 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 FRKP42685 505 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF155Q12901 538 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ASAH1Q13510 395 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC41A3Q96GZ6 507 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 SPATA5L1Q9BVQ7 753 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF780BQ9Y6R6 833 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 FAM172BPA6NC97 362 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 LYRM1O43325 122 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 OMPP47874 163 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 PRR5P85299 388 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 GAB4Q2WGN9 574 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 MINDY4Q4G0A6 757 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ESPNLQ6ZVH7 1005 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 DIO2Q92813 273 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ORAI1Q96D31 301 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 ATF6BQ99941 703 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 RNF32Q9H0A6 362 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 IGFLR1Q9H665 355 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 PEX12O00623 359 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 PEBP1P30086 187 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 GABRA5P31644 462 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 EVI2BP34910 448 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 BNC1Q01954 994 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 TPBGQ13641 420 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 MAPK14Q16539 360 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 GNPDA2Q8TDQ7 276 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 FGF13Q92913 245 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 CFAP54Q96N23 3096 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 H3BSH0 61 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 CLEC3AO75596 197 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 DRD2P14416 443 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 PAICSP22234 425 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 EFR3AQ14156 821 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 OR2L3Q8NG85 312 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 WDFY2Q96P53 400 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
CACNA1A-228ENST00000636610 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SURF4O15260 269 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 GSTM3P21266 225 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 NOS3P29474 1203 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 HTR2BP41595 481 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 E2F1Q01094 437 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SGCGQ13326 291 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SFTPA2Q8IWL1 248 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 KLHL36Q8N4N3 616 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 RAB42Q8N4Z0 105 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 GDPD1Q8N9F7 314 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 FGF11Q92914 225 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 PINK1Q9BXM7 581 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 RBCK1Q9BYM8 510 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 KLHL28Q9NXS3 571 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SEC16AO15027 2179 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SNTNA6NMZ2 147 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 J3QLW9 94 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 EEF1E1O43324 174 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 EMC8O43402 210 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 GNRH1P01148 92 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 F3P13726 295 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF19P17023 458 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 GPLD1P80108 840 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 EFNB1P98172 346 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms