RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ATP6AP1LQ52LC2 224 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 ARL13AQ5H913 290 aaPredicted RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 PPP4R4Q6NUP7 873 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 COX18Q8N8Q8 333 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 OR6Y1Q8NGX8 325 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 PPP1R14CQ8TAE6 165 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 FBXO30Q8TB52 745 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 PIK3R3Q92569 461 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 G6PC3Q9BUM1 346 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 PINK1Q9BXM7 581 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 ROPN1BQ9BZX4 212 aaPredicted RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 TUBB1Q9H4B7 451 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 ANKZF1Q9H8Y5 726 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 ROPN1Q9HAT0 212 aaPredicted RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 CCM2LQ9NUG4 571 aaPredicted RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 NDRG3Q9UGV2 375 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 BAIAP2L1Q9UHR4 511 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 PLEKHA6Q9Y2H5 1048 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 MAP1AP78559 2803 aaPredicted RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 PRRC2AP48634 2157 aaKnown RBP16.19■□□□□ 0.18
PNKP-225ENST00000636214 A0A1W2PNV4 684 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 OR2M5A3KFT3 312 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 PIP5K1BO14986 540 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 NDUFB5O43674 189 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 GMFGO60234 142 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 NKX2-2O95096 273 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 CHRNGP07510 517 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 FGF4P08620 206 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 FCGR2AP12318 317 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 BCKDHAP12694 445 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 PRIM2P49643 509 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 B3GALT5-AS1P59052 145 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 PPP2R2AP63151 447 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 PDE7AQ13946 482 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 SGCBQ16585 318 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 GRAMD1BQ3KR37 738 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 RFTN2Q52LD8 501 aaPredicted RBP16.19■□□□□ 0.18
PNKP-225ENST00000636214 ZNF385BQ569K4 471 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 TCP10LQ8TDR4 215 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 FOXC2Q99958 501 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 MECRQ9BV79 373 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 ATAD3AQ9NVI7 634 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 SLC17A7Q9P2U7 560 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 LGALS13Q9UHV8 139 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
PNKP-225ENST00000636214 ZNF337Q9Y3M9 751 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 PCNX3Q9H6A9 2034 aa16.19■□□□□ 0.18
PNKP-225ENST00000636214 FAM221AA4D161 298 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 SH3D21A4FU49 640 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 TMEM233B4DJY2 109 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 MSTNO14793 375 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 HSPA4LO95757 839 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 TGM6O95932 706 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 LCN1P31025 176 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 SERPINB4P48594 390 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 ZNF41P51814 821 aaPredicted RBP16.18■□□□□ 0.18
PNKP-225ENST00000636214 VSNL1P62760 191 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 KEAP1Q14145 624 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 FGFBP1Q14512 234 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 ZCCHC12Q6PEW1 402 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 ZCCHC23Q6ZST2 131 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 OR5M1Q8NGP8 315 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 DACH2Q96NX9 599 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 PRPF18Q99633 342 aaKnown RBP16.18■□□□□ 0.18
PNKP-225ENST00000636214 PRRG4Q9BZD6 226 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 ZCCHC3Q9NUD5 404 aaKnown RBP16.18■□□□□ 0.18
PNKP-225ENST00000636214 VDAC3Q9Y277 283 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 ZNF175Q9Y473 711 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 SNX8Q9Y5X2 465 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 AP4B1Q9Y6B7 739 aa16.18■□□□□ 0.18
PNKP-225ENST00000636214 SETD2Q9BYW2 2564 aaPredicted RBP16.18■□□□□ 0.18
PNKP-225ENST00000636214 A0A087WZY1 265 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 SCDO00767 359 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 SCAMP2O15127 329 aaKnown RBP16.17■□□□□ 0.18
PNKP-225ENST00000636214 PEX11AO75192 247 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 TNFRSF21O75509 655 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 OXSR1O95747 527 aaPredicted RBP16.17■□□□□ 0.18
PNKP-225ENST00000636214 ACP2P11117 423 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 EFNA1P20827 205 aaPredicted RBP16.17■□□□□ 0.18
PNKP-225ENST00000636214 ATP6V1C1P21283 382 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 KCNJ5P48544 419 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 SIRPAP78324 504 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 PON3Q15166 354 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.17■□□□□ 0.18
PNKP-225ENST00000636214 SPDYE7PQ495Y7 208 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 MFSD12Q6NUT3 480 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 FIGNL1Q6PIW4 674 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 CAMKMTQ7Z624 323 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 GALNT10Q86SR1 603 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 EXOC3L1Q86VI1 746 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 MISPQ8IVT2 679 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 NATD1Q8N6N6 113 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 FNDC5Q8NAU1 212 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 ZNF845Q96IR2 970 aaPredicted RBP16.17■□□□□ 0.18
PNKP-225ENST00000636214 SLC39A3Q9BRY0 314 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 LIME1Q9H400 295 aa16.17■□□□□ 0.18
PNKP-225ENST00000636214 NUP214P35658 2090 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms