RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PLPP4Q5VZY2 271 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF770Q6IQ21 691 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 APOBEC3HQ6NTF7 200 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 STEAP1BQ6NZ63 245 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RFWD3Q6PCD5 774 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM270Q6UE05 265 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CXCL17Q6UXB2 119 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ASRGL1Q7L266 308 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PIWIL3Q7Z3Z3 882 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GPR142Q7Z601 462 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD23Q86SG2 305 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GLRX5Q86SX6 157 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ERO1BQ86YB8 467 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MARCH9Q86YJ5 346 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 WDR49Q8IV35 697 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 LAX1Q8IWV1 398 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 KLHDC8AQ8IYD2 350 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC170Q8IYT3 715 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MCOLN2Q8IZK6 566 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NUP93Q8N1F7 819 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CENPSQ8N2Z9 138 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PARP8Q8N3A8 854 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ARL14Q8N4G2 192 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 LEMD2Q8NC56 503 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CSNK1G2-AS1Q8NCQ2 148 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NEK11Q8NG66 645 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 OR6M1Q8NGM8 313 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 OR1K1Q8NGR3 316 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PSMA8Q8TAA3 256 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 VN1R17PQ8TDU5 208 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ARNTL2Q8WYA1 636 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 HAS2Q92819 552 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM122AQ96E09 287 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RPGRIP1Q96KN7 1286 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MAGEB18Q96M61 343 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 OR5M11Q96RB7 305 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RAB40CQ96S21 281 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RASL10BQ96S79 203 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CCT8L2Q96SF2 557 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SSX3Q99909 188 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 DDX50Q9BQ39 737 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MLPHQ9BV36 600 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NTMT1Q9BV86 223 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 COA1Q9GZY4 146 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NACA2Q9H009 215 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC26A1Q9H2B4 701 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FNDC4Q9H6D8 234 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RPAP3Q9H6T3 665 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 DCTPP1Q9H773 170 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PDFQ9HBH1 243 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MRPL17Q9NRX2 175 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TNFRSF19Q9NS68 423 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZCCHC3Q9NUD5 404 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 DNAJC17Q9NVM6 304 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TMOD2Q9NZR1 351 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RAI14Q9P0K7 980 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF581Q9P0T4 197 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 HMG20BQ9P0W2 317 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 COPS7AQ9UBW8 275 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXW2Q9UKT8 454 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TBX21Q9UL17 535 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CLEC4EQ9ULY5 219 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 BARX2Q9UMQ3 279 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RNF24Q9Y225 148 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NUDCQ9Y266 331 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC6A5Q9Y345 797 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SNX5Q9Y5X3 404 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1HO95180 2353 aa0.84□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC171Q6TFL3 1326 aa0.84□□□□□ -2.28
SMARCB1-209ENST00000635578 MROH5Q6ZUA9 1318 aa0.84□□□□□ -2.28
SMARCB1-209ENST00000635578 MED13LQ71F56 2210 aa0.84□□□□□ -2.28
SMARCB1-209ENST00000635578 USP34Q70CQ2 3546 aa0.84□□□□□ -2.28
SMARCB1-209ENST00000635578 PKD1L2Q7Z442 2459 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DMXL1Q9Y485 3027 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SPTBP11277 2137 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 NCOR2Q9Y618 2525 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CACNA1GO43497 2377 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CHD8Q9HCK8 2581 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 WDFY4Q6ZS81 3184 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 VCANP13611 3396 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SCN3AQ9NY46 2000 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SVILO95425 2214 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 UNC13CQ8NB66 2214 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM208BQ5VWN6 2430 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ATP6AP2A0A1C7CYW4 349 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 A0A1W2PRQ8 180 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 A0A1W2PRV1 198 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM129A0AVI4 362 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SYCE3A1L190 88 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 BCLAF3A2AJT9 711 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 LRRD1A4D1F6 860 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF724A8MTY0 619 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 MEI4A8MW99 385 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 KRTAP4-16G5E9R7 235 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 H0Y626 953 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 H0YIG0 161 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DDX39AO00148 427 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SH2D1BO14796 132 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CTAGE5O15320 804 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GPAA1O43292 621 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms