RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 RAPSNQ13702 412 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 CLPPQ16740 277 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZNF876PQ49A33 203 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 LIPKQ5VXJ0 399 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 SLC25A24Q6NUK1 477 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 GPBP1Q86WP2 473 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 OR4N5Q8IXE1 308 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 OR10T2Q8NGX3 314 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 FBXO25Q8TCJ0 367 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 PNPLA2Q96AD5 504 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 DTNBP1Q96EV8 351 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 USP28Q96RU2 1077 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 IWS1Q96ST2 819 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 DGCR6LQ9BY27 220 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 NT5C3AQ9H0P0 336 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 POMKQ9H5K3 350 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 DCTPP1Q9H773 170 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 POLD4Q9HCU8 107 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 LAMP5Q9UJQ1 280 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZNF175Q9Y473 711 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 MFHAS1Q9Y4C4 1052 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 PATJQ8NI35 1801 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 MIA3Q5JRA6 1907 aa4.29□□□□□ -1.72
TRAPPC9-216ENST00000634178 WDR19Q8NEZ3 1342 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZNF532Q9HCE3 1301 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 SYNJ2BP-COX16A0A087WUM0 186 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 OR5H15A6NDH6 313 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ANHXE9PGG2 379 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 SH2D1BO14796 132 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 CHADO15335 359 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 NDUFA7O95182 113 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 PCCBP05166 539 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 THRBP10828 461 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 GNB3P16520 340 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 IL4RP24394 825 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 PTPN6P29350 595 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 FCGR2BP31994 310 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 FCGR2CP31995 323 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 SLC1A4P43007 532 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 IFNAR2P48551 515 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 NOVP48745 357 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 RPS6P62753 249 aaKnown RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZSWIM7Q19AV6 140 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 PARP6Q2NL67 630 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ACSF3Q4G176 576 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 PWWP2BQ6NUJ5 590 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 MEX3BQ6ZN04 569 aaKnown RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 DPY19L2P2Q6ZN68 376 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ITIH5Q86UX2 942 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 TBC1D21Q8IYX1 336 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 SLCO2A1Q92959 643 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 RAB7BQ96AH8 199 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 FBXO17Q96EF6 278 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 LRR1Q96L50 414 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ALKBH3Q96Q83 286 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ACCSQ96QU6 501 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZNF300Q96RE9 604 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 NODALQ96S42 347 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 TXN2Q99757 166 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 WDR13Q9H1Z4 485 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 SLC6A5Q9Y345 797 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 DSPP15924 2871 aaKnown RBP4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 CEP295Q9C0D2 2601 aa4.28□□□□□ -1.72
TRAPPC9-216ENST00000634178 HELZ2Q9BYK8 2649 aaKnown RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 NRCAMQ92823 1304 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 NPIPB9F8W1W9 429 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 H3BTX0 84 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 TRAFD1O14545 582 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 MCF2LO15068 1137 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 ADAM12O43184 909 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 PRKAB2O43741 272 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 PRKACGP22612 351 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 HTR2AP28223 471 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 RPS4XP62701 263 aaKnown RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 PMP22Q01453 160 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 MGAT3Q09327 533 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 POM121L1PQ3SYA9 428 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 LRRC23Q53EV4 343 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 LCLAT1Q6UWP7 414 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 C3P1Q6ZMU1 363 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 FRRS1Q6ZNA5 592 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 Q6ZSR9 355 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 PAQR9Q6ZVX9 377 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 P4HA3Q7Z4N8 544 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 WDR49Q8IV35 697 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 GCNT2Q8N0V5 402 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 PYROXD2Q8N2H3 581 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 FADS6Q8N9I5 356 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 ADAD2Q8NCV1 583 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms